RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 TOMM20Q15388 145 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 SHQ1Q6PI26 577 aaKnown RBP9.94□□□□□ -0.82
BRCC3-204ENST00000369462 IGFL3Q6UXB1 125 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 ZBTB49Q6ZSB9 765 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 SVOPLQ8N434 492 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 CBR4Q8N4T8 237 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 TMEM178AQ8NBL3 297 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 TMEM234Q8WY98 164 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 SDCCAG3Q96C92 435 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 ADAM19Q9H013 955 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 COQ10BQ9H8M1 238 aa9.94□□□□□ -0.82
BRCC3-204ENST00000369462 BOKQ9UMX3 212 aaPredicted RBP9.94□□□□□ -0.82
BRCC3-204ENST00000369462 TNRC6AQ8NDV7 1962 aaKnown RBP9.94□□□□□ -0.82
BRCC3-204ENST00000369462 TRAV17A0A0B4J275 112 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 SHISA8B8ZZ34 492 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 PRKCAP17252 672 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 CCNA2P20248 432 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 MERTKQ12866 999 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 MICAQ29983 383 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 PLPPR5Q32ZL2 321 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 SWT1Q5T5J6 900 aaKnown RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 OGFRL1Q5TC84 451 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ZNF730Q6ZMV8 503 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 RRM2BQ7LG56 351 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 HIPK1Q86Z02 1210 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 P3H2Q8IVL5 708 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 KDF1Q8NAX2 398 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 OR9Q2Q8NGE9 314 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ST8SIA1Q92185 356 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 SCMH1Q96GD3 660 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 SLC29A1Q99808 456 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 C9orf16Q9BUW7 83 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 RASSF4Q9H2L5 321 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ANKRD19PQ9H560 264 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 OSGIN1Q9UJX0 560 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 PKD1L2Q7Z442 2459 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 SH3PXD2BA1X283 911 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ELOA3DA6NLF2 546 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 SOCS2O14508 198 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 OR10H3O60404 316 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ITGB2P05107 769 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 MEOX1P50221 254 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 FOXK1P85037 733 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ELOA3BQ3SY89 546 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ANKRD34AQ69YU3 496 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 GRINAQ7Z429 371 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ATG4DQ86TL0 474 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 GALNT4Q8N4A0 578 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ELOA3Q8NG57 546 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 OR4K5Q8NGD3 323 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 GIPC3Q8TF64 312 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 ACOT11Q8WXI4 607 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 NRBF2Q96F24 287 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 MPP4Q96JB8 637 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 FUZQ9BT04 418 aa9.93□□□□□ -0.82
BRCC3-204ENST00000369462 RPH3AQ9Y2J0 694 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 TLN1Q9Y490 2541 aaKnown RBP9.93□□□□□ -0.82
BRCC3-204ENST00000369462 A0A087WUJ7 227 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 FAM47E-STBD1D6RA91 191 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 KPNA4O00629 521 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-204ENST00000369462 EI24O14681 340 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 CCNB2O95067 398 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 CXCR1P25024 350 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 DSCR4P56555 118 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-204ENST00000369462 FOXF1Q12946 379 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 OR10G2Q8NGC3 310 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 OR5M1Q8NGP8 315 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 TMEM239Q8WW34 195 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 FEVQ99581 238 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 SMURF2Q9HAU4 748 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 DKKL1Q9UK85 242 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 ZIC3O60481 467 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 TRAPPC6AO75865 159 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 FAM87AP0C7U9 286 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 PNMTP11086 282 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 GDF1P27539 372 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 PLGLB1Q02325 96 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 ADGRG3Q86Y34 549 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 NRMQ8IXM6 262 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 ATG16L2Q8NAA4 619 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 MAGEE2Q8TD90 523 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-204ENST00000369462 RELTQ969Z4 430 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 ARHGAP9Q9BRR9 750 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 TTTY12Q9BZ98 90 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 UBQLN3Q9H347 655 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 TP53TG5Q9Y2B4 290 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 C15orf41Q9Y2V0 281 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 SPTA1P02549 2419 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 FREM3P0C091 2139 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 FAM166BA8MTA8 275 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 POU2F1P14859 743 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 ZNF26P17031 533 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-204ENST00000369462 HK1P19367 917 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 HTR3AP46098 478 aa9.92□□□□□ -0.82
BRCC3-204ENST00000369462 POLR2HP52434 150 aaKnown RBP9.92□□□□□ -0.82
BRCC3-204ENST00000369462 GK3PQ14409 553 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms