RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SECISBP2Q96T21 854 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 ZNF559Q9BR84 538 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 YIPF4Q9BSR8 244 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 SLC19A3Q9BZV2 496 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 WWTR1Q9GZV5 400 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 FAM118AQ9NWS6 357 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 PDP1Q9P0J1 537 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 MKLN1Q9UL63 735 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 TMCC3Q9ULS5 477 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ORC6Q9Y5N6 252 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 LOC100130705A0A1B0GUX0 176 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 GXYLT2A0PJZ3 443 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 TRAPPC13A5PLN9 417 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 WIPF3A6NGB9 483 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 FIGNL2A6NMB9 653 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ETV2O00321 342 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 EIF4E2O60573 245 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 TPST2O60704 377 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ZFAND5O76080 213 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 CCNB2O95067 398 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 TNFAIP8O95379 198 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 IGKV1D-16P01601 117 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 MT-ND1P03886 318 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 CCDC159P0C7I6 412 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ICAM2P13598 275 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 IGFBP5P24593 272 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 PTGER1P34995 402 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ACAA2P42765 397 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 MAP2K6P52564 334 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 CHN2P52757 468 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 IST1P53990 364 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 SOX8P57073 446 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 RGS8P57771 180 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 SLC26A5P58743 744 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ISL1P61371 349 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 TUBA4AP68366 448 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 RNF4P78317 190 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 PLAURQ03405 335 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 BLMHQ13867 455 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ZNF169Q14929 603 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 MAPK14Q16539 360 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 FLYWCH1Q4VC44 716 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 SLC25A30Q5SVS4 291 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 OTUD3Q5T2D3 398 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 MRPL2Q5T653 305 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 PAPD4Q6PIY7 484 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 HSDL2Q6YN16 418 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 COMTD1Q86VU5 262 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 VRK2Q86Y07 508 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 CLIP4Q8N3C7 705 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 SIRT6Q8N6T7 355 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 OR10Q1Q8NGQ4 319 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 DNAJA4Q8WW22 397 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 TRUB1Q8WWH5 349 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 PIK3R3Q92569 461 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 ARSGQ96EG1 525 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 RMND5BQ96G75 393 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 FEVQ99581 238 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 FNDC11Q9BVV2 318 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 OR8D2Q9GZM6 311 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 LHPPQ9H008 270 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 NXF5Q9H1B4 397 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 MMP25Q9NPA2 562 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 PNO1Q9NRX1 252 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 DNAJB12Q9NXW2 375 aaKnown RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 TUBA8Q9NY65 449 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 ZNF223Q9UK11 482 aaPredicted RBP8.03□□□□□ -1.12
SNX27-201ENST00000368838 DTX4Q9Y2E6 619 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 OR10H1Q9Y4A9 318 aa8.03□□□□□ -1.12
SNX27-201ENST00000368838 IGLV3-32A0A0A0MS00 114 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 IGHV1-45A0A0A0MS14 117 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 A0A0B4J2E0 115 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 A0A1B0GX12 115 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 H3BNH8 94 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 KLF4O43474 513 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 CHP2O43745 196 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 FADS1O60427 444 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 MPZL2O60487 215 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 ZG16O60844 167 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 BCAS1O75363 584 aaPredicted RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 LYPD3O95274 346 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 SNAP29O95721 258 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 LYNP07948 512 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 CELA3AP09093 270 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 SLC6A8P48029 635 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 GSSP48637 474 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 TMED10P49755 219 aaKnown RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 CDH12P55289 794 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 SUMO3P55854 103 aaPredicted RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 CTBP2P56545 445 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 NRG3P56975 720 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 NUP107P57740 925 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 SPIBQ01892 262 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 NPRL3Q12980 569 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 TOP3AQ13472 1001 aaPredicted RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 PIN1Q13526 163 aaPredicted RBP8.02□□□□□ -1.13
SNX27-201ENST00000368838 GPR68Q15743 365 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 EXOC3L2Q2M3D2 409 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 ANKDD1AQ495B1 522 aa8.02□□□□□ -1.13
SNX27-201ENST00000368838 C1QL3Q5VWW1 255 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms