RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PEX12O00623 359 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 NUDT21O43809 227 aaKnown RBP9.85□□□□□ -0.83
TPM3-212ENST00000368533 CSO75390 466 aaKnown RBP9.85□□□□□ -0.83
TPM3-212ENST00000368533 TIAF1O95411 115 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 CH25HO95992 272 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 TSPAN19P0C672 248 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 ZNF155Q12901 538 aaPredicted RBP9.85□□□□□ -0.83
TPM3-212ENST00000368533 GNA13Q14344 377 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 FGFBP1Q14512 234 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 QPRTQ15274 297 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 PRTGQ2VWP7 1150 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 ZBTB37Q5TC79 503 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 C17orf82Q86X59 251 aaPredicted RBP9.85□□□□□ -0.83
TPM3-212ENST00000368533 OR6T1Q8NGN1 323 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 PHF21AQ96BD5 680 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 C1GALT1C1Q96EU7 318 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 GIMAP5Q96F15 307 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 RBM18Q96H35 190 aaKnown RBP9.85□□□□□ -0.83
TPM3-212ENST00000368533 PTCHD1Q96NR3 888 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 TRIM45Q9H8W5 580 aaPredicted RBP9.85□□□□□ -0.83
TPM3-212ENST00000368533 SCPEP1Q9HB40 452 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 APMAPQ9HDC9 416 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 FGF21Q9NSA1 209 aa9.85□□□□□ -0.83
TPM3-212ENST00000368533 SPIN1Q9Y657 262 aaPredicted RBP9.85□□□□□ -0.83
TPM3-212ENST00000368533 ZFHX2Q9C0A1 2572 aaPredicted RBP9.84□□□□□ -0.83
TPM3-212ENST00000368533 IGHV3-20A0A0C4DH32 117 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 A8MVJ9 347 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 E9PQ18 207 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 PLA2G10O15496 165 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 ZNF749O43361 778 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 PRKYO43930 277 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 CDRT1O95170 752 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 CSF3P09919 207 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 GKN3PP0CG01 181 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 ACP2P11117 423 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 TDGF1P13385 188 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 MYL12AP19105 171 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 GABRA3P34903 492 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 ATP6V1E1P36543 226 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 TALDO1P37837 337 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 TAS2R41P59536 307 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.84□□□□□ -0.83
TPM3-212ENST00000368533 SCN1BQ07699 218 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 TMEM64Q6YI46 380 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 CREB3L2Q70SY1 520 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 LINC00469Q8N7U9 141 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 ZNF680Q8NEM1 530 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 SAP25Q8TEE9 199 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 UQCC2Q9BRT2 126 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 DPCDQ9BVM2 203 aaPredicted RBP9.84□□□□□ -0.83
TPM3-212ENST00000368533 MND1Q9BWT6 205 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 SRRQ9GZT4 340 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 HHATLQ9HCP6 504 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 PRTFDC1Q9NRG1 225 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 CUTCQ9NTM9 273 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 B3GNT2Q9NY97 397 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 ERVK-19Q9WJR5 959 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 CPSF4LA6NMK7 179 aaKnown RBP9.84□□□□□ -0.83
TPM3-212ENST00000368533 MMP11P24347 488 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 TSFMP43897 325 aaKnown RBP9.84□□□□□ -0.83
TPM3-212ENST00000368533 HSD11B2P80365 405 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 PYDC2Q56P42 97 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 MFSD12Q6NUT3 480 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 PLET1Q6UQ28 207 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 ZER1Q7Z7L7 766 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 PLXDC1Q8IUK5 500 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 GPR135Q8IZ08 494 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 OR56A1Q8NGH5 318 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 NRSN2Q9GZP1 204 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 EGLN3Q9H6Z9 239 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 KCND3Q9UK17 655 aa9.84□□□□□ -0.83
TPM3-212ENST00000368533 PTPRZ1P23471 2315 aaPredicted RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 A0A1B0GTQ1 180 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 FABP7O15540 132 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 TBX19O60806 448 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 EPPINO95925 133 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 C1QBP02746 253 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 SCG5P05408 212 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 HOXD4P09016 255 aaPredicted RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 RNH1P13489 461 aaKnown RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 RPS5P46782 204 aaKnown RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 GABRA4P48169 554 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 GIPRP48546 466 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 RORCP51449 518 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 RAB38P57729 211 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 TNK1Q13470 666 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.83□□□□□ -0.842e-17■□□□□ 10.2
TPM3-212ENST00000368533 ZNF311Q5JNZ3 666 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 C22orf42Q6IC83 251 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 ACSM5Q6NUN0 579 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 PRSS42Q7Z5A4 293 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 WDR5BQ86VZ2 330 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 ZFP41Q8N8Y5 198 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 DTWD2Q8NBA8 298 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 OR6C1Q96RD1 312 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 USB1Q9BQ65 265 aaKnown RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 SAV1Q9H4B6 383 aaPredicted RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 BRD7Q9NPI1 651 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 PRMT8Q9NR22 394 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms