RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.24□□□□□ -0.77
NECTIN4-201ENST00000368012 MCCC2Q9HCC0 563 aa10.24□□□□□ -0.77
NECTIN4-201ENST00000368012 SF3B6Q9Y3B4 125 aaKnown RBP10.24□□□□□ -0.77
NECTIN4-201ENST00000368012 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
NECTIN4-201ENST00000368012 PLXND1Q9Y4D7 1925 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 IMPA2O14732 288 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 TBX6O95947 436 aaPredicted RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 WNT1P04628 370 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 NPR2P20594 1047 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ITGB8P26012 769 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 TEX261Q6UWH6 196 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 NRROSQ86YC3 692 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ZNF687Q8N1G0 1237 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ZNF511Q8NB15 262 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 OR2L5Q8NG80 312 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 OR52B4Q8NGK2 314 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 THEM6Q8WUY1 208 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 GDF15Q99988 308 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 APOBEC3BQ9UH17 382 aaKnown RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ICKQ9UPZ9 632 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 U3KQ87 197 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 HEATR5BQ9P2D3 2071 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 TRAPPC2P0DI81 140 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 TRAPPC2BP0DI82 140 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 OMPP47874 163 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ERVK-25P63136 954 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 C19orf57Q0VDD7 668 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 FUT5Q11128 374 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 GRM7Q14831 915 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ALG10BQ5I7T1 473 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 METAP1DQ6UB28 335 aaPredicted RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ZNF836Q6ZNA1 936 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 GID4Q8IVV7 300 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 NRSN1Q8IZ57 195 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ANGPTL6Q8NI99 470 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 PAWRQ96IZ0 340 aaKnown RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 NMNAT3Q96T66 252 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 C1QTNF2Q9BXJ5 285 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 MTHFD2LQ9H903 347 aaPredicted RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ZMAT3Q9HA38 289 aaKnown RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 FGF20Q9NP95 211 aaPredicted RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 COPS3Q9UNS2 423 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 AP1M2Q9Y6Q5 423 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 SPACA6W5XKT8 324 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 A0A1W2PQU0 124 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 SERTM1A2A2V5 107 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 TRAPPC13A5PLN9 417 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 C4orf51C9J302 202 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ATF1P18846 271 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 C21orf58P58505 322 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 AADACL4Q5VUY2 407 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ZNF782Q6ZMW2 699 aaPredicted RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 MBOAT2Q6ZWT7 520 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 C9orf62Q8N4C0 152 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 CCL4L1Q8NHW4 92 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 RERGQ96A58 199 aaPredicted RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ADAD1Q96M93 576 aaKnown RBP10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 PDCD10Q9BUL8 212 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 ULBP3Q9BZM4 244 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 FKRPQ9H9S5 495 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 NOX4Q9NPH5 578 aa10.23□□□□□ -0.77
NECTIN4-201ENST00000368012 MYO15AQ9UKN7 3530 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 DOCK9Q9BZ29 2069 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 GXYLT2A0PJZ3 443 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 UBE2QL1A1L167 161 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 SLC22A31A6NKX4 558 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 ANXA2P2A6NMY6 339 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 CASC3O15234 703 aaKnown RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 B3GALT2O43825 422 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 GMDSO60547 372 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 ANXA2P07355 339 aaKnown RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 PER3P56645 1201 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 TCTE1Q5JU00 501 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 KIAA1324Q6UXG2 1013 aaKnown RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 NDUFAF7Q7L592 441 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 SSX6Q7RTT6 188 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 HDDC2Q7Z4H3 204 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 GJD3Q8N144 294 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 ZNF676Q8N7Q3 588 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 ZDHHC1Q8WTX9 485 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 ZNF296Q8WUU4 475 aaPredicted RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 CNOT9Q92600 299 aaKnown RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 DVL3Q92997 716 aaPredicted RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 C1QTNF7Q9BXJ2 289 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 POT1Q9NUX5 634 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 SERGEFQ9UGK8 458 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 FARSAQ9Y285 508 aaKnown RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 H0Y8X5 98 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 SELENOFO60613 162 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 CLEC3AO75596 197 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 ARL6IP5O75915 188 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 RAF1P04049 648 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 ITPKBP27987 946 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 RAD52P43351 418 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 SELENOPP49908 381 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 VASPP50552 380 aaPredicted RBP10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 MAP2K6P52564 334 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 PITPNAQ00169 270 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 REEP5Q00765 189 aa10.22□□□□□ -0.77
NECTIN4-201ENST00000368012 TMEM65Q6PI78 240 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms