RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 GK2Q14410 553 aaPredicted RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 UGCGQ16739 394 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 FAM78AQ5JUQ0 283 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SAMD12Q8N8I0 201 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SPTSSAQ969W0 71 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 OR6C1Q96RD1 312 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 B3GNT5Q9BYG0 378 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 GPR62Q9BZJ7 368 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 PRDM7Q9NQW5 492 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SLC35D1Q9NTN3 355 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM100Q9NV29 134 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 NUFIP1Q9UHK0 495 aaKnown RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 TCFL5Q9UL49 500 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 FAM230AA0A1W2PPH8 454 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 CRYAAP02489 173 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 HTR3AP46098 478 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SNTB2Q13425 540 aaKnown RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SLC17A1Q14916 467 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 RABL3Q5HYI8 236 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM236Q5W0B7 351 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 NXPE4Q6UWF7 544 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 LARP4Q71RC2 724 aaKnown RBP eCLIP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 ERMP1Q7Z2K6 904 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 SPRED1Q7Z699 444 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 VASH2Q86V25 355 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 PROKR2Q8NFJ6 384 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 GJC3Q8NFK1 279 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 LNX1Q8TBB1 728 aaPredicted RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 KATNBL1Q9H079 304 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 PAK1IP1Q9NWT1 392 aaPredicted RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 P2RX2Q9UBL9 471 aa8.11□□□□□ -1.11
SYNE1-206ENST00000367253 BAZ2AQ9UIF9 1905 aaKnown RBP8.11□□□□□ -1.11
SYNE1-206ENST00000367253 URB1O60287 2271 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 A0A1W2PQ09 198 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SLC22A23A1A5C7 686 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 PRR33A8MZF0 331 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 K7EQS6 105 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SPP1P10451 314 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ENPP1P22413 925 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 HMGCLP35914 325 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 EPHA5P54756 1037 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 TLE3Q04726 772 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 FAM174BQ3ZCQ3 159 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 UNQ9370/PRO34162Q6UXP9 181 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ANKRD46Q86W74 232 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SLC15A4Q8N697 577 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 C1orf127Q8N9H9 656 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 UBAC2Q8NBM4 344 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 RBPMSQ93062 196 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 LRRC58Q96CX6 371 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 CTRCQ99895 268 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 PKP2Q99959 881 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 FOXQ1Q9C009 403 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 VCX2Q9H322 139 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 TFB2MQ9H5Q4 396 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 MYEF2Q9P2K5 600 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 KCTD3Q9Y597 815 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 BCORQ6W2J9 1755 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SLC22A20A6NK97 555 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 GABRDO14764 452 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 TPST2O60704 377 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 DEDDO75618 318 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 HNRNPH3P31942 346 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ERVK-16P61578 105 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 NPRL3Q12980 569 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 PDZK1IP1Q13113 114 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SLC10A1Q14973 349 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OR4D1Q15615 310 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SLC10A6Q3KNW5 377 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 DHRS13Q6UX07 377 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SEZ6L2Q6UXD5 910 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ASCL4Q6XD76 172 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SHKBP1Q8TBC3 707 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 RNF170Q96K19 258 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 MYOTQ9UBF9 498 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM218A2RU14 115 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 J3KRW8 73 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SIAH2O43255 324 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 HNF4GQ14541 408 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 CDONQ4KMG0 1287 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 CMIPQ8IY22 773 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OR7G3Q8NG95 312 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OR5B17Q8NGF7 314 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OR52H1Q8NGJ2 320 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OR13C3Q8NGS6 347 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 OR2T35Q8NGX2 323 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 CLEC4DQ8WXI8 215 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SNX18Q96RF0 628 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 SERINC2Q96SA4 455 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF395Q9H8N7 513 aaPredicted RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 GRHPRQ9UBQ7 328 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 LY75O60449 1722 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 H0Y8G0 127 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 PDE6DO43924 150 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 RPS14P62263 151 aaKnown RBP8.1□□□□□ -1.11
SYNE1-206ENST00000367253 LRRC73Q5JTD7 316 aa8.1□□□□□ -1.11
SYNE1-206ENST00000367253 GDPD3Q7L5L3 318 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms