RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 IFT27Q9BW83 186 aa13.7□□□□□ -0.22
NEK2-201ENST00000366998 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
NEK2-201ENST00000366998 PISDQ9UG56 409 aa13.7□□□□□ -0.22
NEK2-201ENST00000366998 SNTNA6NMZ2 147 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 PRODHO43272 600 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 FADS1O60427 444 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 EIF4E2O60573 245 aaKnown RBP13.69□□□□□ -0.22
NEK2-201ENST00000366998 CBFA2T3O75081 653 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 STK17BO94768 372 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 ATE1O95260 518 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 SLC2A10O95528 541 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 PTHP01270 115 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 JMJD7P0C870 316 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 ADORA3P0DMS8 318 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 PNMTP11086 282 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 ENDOUP21128 410 aaKnown RBP13.69□□□□□ -0.22
NEK2-201ENST00000366998 NR4A1P22736 598 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 GRK5P34947 590 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 FBXW4P57775 412 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 E2F1Q01094 437 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 THSD4Q6ZMP0 1018 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 OR8K3Q8NH51 312 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 FGF11Q92914 225 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 OTULINQ96BN8 352 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 TMEM80Q96HE8 168 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 KLHDC3Q9BQ90 382 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 DCUN1D5Q9BTE7 237 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 MED17Q9NVC6 651 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
NEK2-201ENST00000366998 ZNF354AO60765 605 aaPredicted RBP13.68□□□□□ -0.22
NEK2-201ENST00000366998 UMODP07911 640 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 ADRA2AP08913 450 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 IRF3Q14653 427 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 PCOLCEQ15113 449 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 BTBD16Q32M84 506 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 SLC35F1Q5T1Q4 408 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 ATG4DQ86TL0 474 aaPredicted RBP13.68□□□□□ -0.22
NEK2-201ENST00000366998 ALDH16A1Q8IZ83 802 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 CRELD1Q96HD1 420 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 CCNL2Q96S94 520 aaPredicted RBP13.68□□□□□ -0.22
NEK2-201ENST00000366998 CDC6Q99741 560 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 CDCA4Q9BXL8 241 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 DEFB126Q9BYW3 111 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 ENPP5Q9UJA9 477 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 PCNX3Q9H6A9 2034 aa13.68□□□□□ -0.22
NEK2-201ENST00000366998 PMS2P1A4D2B8 440 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 TMEM200CA6NKL6 621 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 C4orf47A7E2U8 309 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 KDM4EB2RXH2 506 aaPredicted RBP13.67□□□□□ -0.22
NEK2-201ENST00000366998 LRRN3E7EW58 273 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 TMX2-CTNND1H3BSU7 103 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 BHLHE40O14503 412 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 CSO75390 466 aaKnown RBP13.67□□□□□ -0.22
NEK2-201ENST00000366998 PGCP20142 388 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 CCNA2P20248 432 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 FOLR3P41439 243 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 SLC1A3P43003 542 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 CDH11P55287 796 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 SH3BGRP55822 239 aaPredicted RBP13.67□□□□□ -0.22
NEK2-201ENST00000366998 TIGD6Q17RP2 521 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 ISXQ2M1V0 245 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 ANKRD13BQ86YJ7 626 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 OR5W2Q8NH69 310 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 YIPF6Q96EC8 236 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 RNFT2Q96EX2 444 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 MCCC2Q9HCC0 563 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 ZNF318Q5VUA4 2279 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 IGKV1D-42A0A075B6H8 117 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 LOC102723996A0A087X1L8 192 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 A0A1W2PPW3 197 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 PTP4A3O75365 173 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 KLF7O75840 302 aaPredicted RBP13.67□□□□□ -0.22
NEK2-201ENST00000366998 APOL3O95236 402 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 NADKO95544 446 aaPredicted RBP13.67□□□□□ -0.22
NEK2-201ENST00000366998 PPP1R3DO95685 299 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 RAB36O95755 333 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 HSMCR30P0CW71 290 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 MST1P26927 711 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 ACVR2AP27037 513 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 TACR3P29371 465 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 SLC6A6P31641 620 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 LSAMPQ13449 338 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 CBFBQ13951 182 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 MED22Q15528 200 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 TMEM44Q2T9K0 475 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 KLHL22Q53GT1 634 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 POMZP3Q6PJE2 187 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 ZNF517Q6ZMY9 492 aaPredicted RBP13.67□□□□□ -0.22
NEK2-201ENST00000366998 SLC16A12Q6ZSM3 486 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 CXXC5Q7LFL8 322 aaKnown RBP13.67□□□□□ -0.22
NEK2-201ENST00000366998 ZNF367Q7RTV3 350 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 P2RY8Q86VZ1 359 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 LNX2Q8N448 690 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 OR52I1Q8NGK6 324 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 RFKQ969G6 155 aa13.67□□□□□ -0.22
NEK2-201ENST00000366998 ZNF524Q96C55 264 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms