RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CRYBB1P53674 252 aaPredicted RBP2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 RPS14P62263 151 aaKnown RBP2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 CHRNB3Q05901 458 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 GSG1Q2KHT4 349 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 TRIM16LQ309B1 348 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 BOLA3Q53S33 107 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 OR2B11Q5JQS5 317 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 MARC1Q5VT66 337 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 CCDC137Q6PK04 289 aaKnown RBP2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 DNM1P46Q6ZS02 220 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 TRPM8Q7Z2W7 1104 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 HPS6Q86YV9 775 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 APOBEC3FQ8IUX4 373 aaKnown RBP2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 SKA3Q8IX90 412 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 SLC35F2Q8IXU6 374 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 OR2L13Q8N349 312 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 MRAPQ8TCY5 172 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 PAQR8Q8TEZ7 354 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 RPRD1AQ96P16 312 aaPredicted RBP2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 SLC38A2Q96QD8 506 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 MTMR9Q96QG7 549 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 CCNL2Q96S94 520 aaPredicted RBP2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 PYGO2Q9BRQ0 406 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 RAB34Q9BZG1 259 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 POPDC2Q9HBU9 364 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 Q9UF83 564 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 ZNF107Q9UII5 783 aaPredicted RBP2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 HCFC1P51610 2035 aa2.79□□□□□ -1.96
RNU6-28P-201ENST00000362378 XKRY2A2RUG3 117 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 OR52A4PA6NMU1 304 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 CCDC169A6NNP5 214 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 TRDCB7Z8K6 153 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 WWP2O00308 870 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 TIMM8AO60220 97 aaPredicted RBP2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 OR10H3O60404 316 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 RAMP3O60896 148 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 HMMRO75330 724 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 AP2A1O95782 977 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 LGALS2P05162 132 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 NCK1P16333 377 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 COX5AP20674 150 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 GCAP28676 217 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 EPHX2P34913 555 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 UGT1A3P35503 534 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 LEPP41159 167 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 PTGDSP41222 190 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 DSCR10P59022 87 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 AANATQ16613 207 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 LRRC36Q1X8D7 754 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 PAGE2BQ5JRK9 111 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 PHYHD1Q5SRE7 291 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 SLC25A30Q5SVS4 291 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 PDZK1Q5T2W1 519 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 ATL3Q6DD88 541 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 FRA10AC1Q70Z53 315 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 RUFY3Q7L099 469 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 TRIM69Q86WT6 500 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 ZNF525Q8N782 197 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 ATP6V0D2Q8N8Y2 350 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 MAIP1Q8WWC4 291 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 UBE2E3Q969T4 207 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 TUBGCP3Q96CW5 907 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 MS4A14Q96JA4 679 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 CNDP1Q96KN2 507 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 COPS8Q99627 209 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 RNF126Q9BV68 326 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 DEFB126Q9BYW3 111 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 Q9H3A6 140 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 YY1AP1Q9H869 796 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 ZNF702PQ9H963 129 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 FANCFQ9NPI8 374 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 DCAF16Q9NXF7 216 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 ONECUT1Q9UBC0 465 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 ZNF639Q9UID6 485 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 PLLPQ9Y342 182 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 RALGAPA1Q6GYQ0 2036 aa2.78□□□□□ -1.96
RNU6-28P-201ENST00000362378 CFAP65Q6ZU64 1925 aaKnown RBP2.78□□□□□ -1.97
RNU6-28P-201ENST00000362378 CLSPNQ9HAW4 1339 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 IGHV1OR15-1A0A075B7D0 117 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 SMIM28A0A1B0GU29 152 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 HELTA6NFD8 242 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 VSTM2BA6NLU5 285 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 KIF2AO00139 706 aaPredicted RBP2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 AP3B1O00203 1094 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 PFKFB2O60825 505 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 LYPLA1O75608 230 aaPredicted RBP2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 SERF1AO75920 110 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 SLITRK3O94933 977 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 CLDN9O95484 217 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 IGHV3-23P01764 117 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 SEMG1P04279 462 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 CCDC130P13994 396 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 MX1P20591 662 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 VDAC1P21796 283 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 HOXD10P28358 340 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 PLK1P53350 603 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 CDH4P55283 916 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 RIPPLY3P57055 190 aa2.77□□□□□ -1.97
RNU6-28P-201ENST00000362378 RIPK4P57078 832 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms