RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CDK4P11802 303 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 TRIM61Q5EBN2 209 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 CNEP1R1Q8N9A8 125 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 LRIG1Q96JA1 1093 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 SORCS2Q96PQ0 1159 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 WWTR1Q9GZV5 400 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 NAA50Q9GZZ1 169 aaKnown RBP15.03■□□□□ -0
COL18A1-203ENST00000359759 VAPAQ9P0L0 249 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 OSGIN2Q9Y236 505 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 SPO11Q9Y5K1 396 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 DUOX1Q9NRD9 1551 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 A0A0A6YYC8 382 aaPredicted RBP15.03■□□□□ -0
COL18A1-203ENST00000359759 I3L1I5 382 aaPredicted RBP15.03■□□□□ -0
COL18A1-203ENST00000359759 CD68P34810 354 aaPredicted RBP15.03■□□□□ -0
COL18A1-203ENST00000359759 OR2G6Q5TZ20 316 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 AADACL3Q5VUY0 350 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 GGHQ92820 318 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 XYLT2Q9H1B5 865 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 CUTCQ9NTM9 273 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 D6RAR5 112 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 RNASET2O00584 256 aaKnown RBP15.03■□□□□ -0
COL18A1-203ENST00000359759 FZD7O75084 574 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 DDCP20711 480 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 HOXA9P31269 272 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 CHRNEQ04844 493 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 DEFB133Q30KQ1 61 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 SLC12A9Q9BXP2 914 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 SLC17A9Q9BYT1 436 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 ADAM19Q9H013 955 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 FN3KRPQ9HA64 309 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 PHLPP1O60346 1717 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 DBPQ10586 325 aaPredicted RBP15.03■□□□□ -0
COL18A1-203ENST00000359759 TMEM41BQ5BJD5 291 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 OR7E24Q6IFN5 339 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 ZNF322Q6U7Q0 402 aaPredicted RBP15.03■□□□□ -0
COL18A1-203ENST00000359759 HORMAD2Q8N7B1 307 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 TMEM163Q8TC26 289 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 NEIL2Q969S2 332 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 LPAR4Q99677 370 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 ELOVL3Q9HB03 270 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 MROH1Q8NDA8 1641 aa15.03■□□□□ -0
COL18A1-203ENST00000359759 GABRR3A8MPY1 467 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 SNRPBP14678 240 aaKnown RBP15.02■□□□□ -0
COL18A1-203ENST00000359759 TAS2R30P59541 319 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 ABHD17BQ5VST6 288 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 TIGD3Q6B0B8 471 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 SMIM15Q7Z3B0 74 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 TMEM25Q86YD3 366 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 ADAMTS18Q8TE60 1221 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 TAS2R16Q9NYV7 291 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 GDF1P27539 372 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 SMN1Q16637 294 aaKnown RBP15.02■□□□□ -0
COL18A1-203ENST00000359759 CPZQ66K79 652 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 Q6ZPB1 254 aaPredicted RBP15.02■□□□□ -0
COL18A1-203ENST00000359759 OPA3Q9H6K4 179 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 SDHAF2Q9NX18 166 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 FBXO7Q9Y3I1 522 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 POU3F2P20265 443 aaPredicted RBP15.02■□□□□ -0
COL18A1-203ENST00000359759 CASP3P42574 277 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 EMP2P54851 167 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 ELAVL3Q14576 367 aaKnown RBP15.02■□□□□ -0
COL18A1-203ENST00000359759 TESK1Q15569 626 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 BAGE3Q86Y29 109 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 BAGE2Q86Y30 109 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 LILRB4Q8NHJ6 448 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 UBXN10Q96LJ8 280 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 BTNL2Q9UIR0 455 aa15.02■□□□□ -0
COL18A1-203ENST00000359759 TRAPPC2LH3BP13 241 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 I6L893 689 aaPredicted RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 TNFRSF10AO00220 468 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 RPA2P15927 270 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 PPP3CBP16298 524 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 GPX3P22352 226 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 RAB40BQ12829 278 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 ARL6IP1Q15041 203 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 CD200R1Q8TD46 325 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 ZNF845Q96IR2 970 aaPredicted RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 KIF25Q9UIL4 384 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 RFXAPO00287 272 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 EGFP01133 1207 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 TP53P04637 393 aaPredicted RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 ITGAMP11215 1152 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 GPR18Q14330 331 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 ZNF169Q14929 603 aaPredicted RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 ZNF775Q96BV0 537 aaPredicted RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 CMSS1Q9BQ75 279 aaKnown RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 C1QTNF2Q9BXJ5 285 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 CPEB1Q9BZB8 566 aaKnown RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 ZNF286AQ9HBT8 521 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 HHATLQ9HCP6 504 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 ZNF355PQ9NSJ1 428 aa15.02□□□□□ -0.01
COL18A1-203ENST00000359759 PURGQ9UJV8 347 aaKnown RBP15.02□□□□□ -0.01
COL18A1-203ENST00000359759 F13BP05160 661 aa15.01□□□□□ -0.01
COL18A1-203ENST00000359759 EEF1A2Q05639 463 aaKnown RBP15.01□□□□□ -0.01
COL18A1-203ENST00000359759 FXNQ16595 210 aa15.01□□□□□ -0.01
COL18A1-203ENST00000359759 ATPAF1Q5TC12 328 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-203ENST00000359759 LMO3Q8TAP4 145 aa15.01□□□□□ -0.01
COL18A1-203ENST00000359759 CPNE4Q96A23 557 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-203ENST00000359759 C20orf24Q9BUV8 137 aa15.01□□□□□ -0.01
COL18A1-203ENST00000359759 HCAR1Q9BXC0 346 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms