RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ZNHIT1O43257 154 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 SLC10A1Q14973 349 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 ZNF613Q6PF04 617 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 GRINAQ7Z429 371 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 ADGRG3Q86Y34 549 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 NKAIN4Q8IVV8 208 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 GTPBP8Q8N3Z3 284 aaPredicted RBP22.95■■□□□ 1.26
SSBP3-202ENST00000357475 ZBTB8AQ96BR9 441 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 MRGPRX4Q96LA9 322 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 NMNAT1Q9HAN9 279 aaPredicted RBP22.95■■□□□ 1.26
SSBP3-202ENST00000357475 NPIPA1Q9UND3 350 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 MRPS18CQ9Y3D5 142 aaKnown RBP22.95■■□□□ 1.26
SSBP3-202ENST00000357475 FAM32AQ9Y421 112 aaKnown RBP22.95■■□□□ 1.26
SSBP3-202ENST00000357475 DNAJC13O75165 2243 aa22.95■■□□□ 1.26
SSBP3-202ENST00000357475 OR5F1O95221 314 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 OPN1LWP04000 364 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 ITGA2P17301 1181 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 RRM2P31350 389 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 LSM11P83369 360 aaKnown RBP eCLIP22.94■■□□□ 1.26
SSBP3-202ENST00000357475 TRILQ7L0X0 811 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 P3H2Q8IVL5 708 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 OFCC1Q8IZS5 231 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 OR52J3Q8NH60 311 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 SNRNP40Q96DI7 357 aaKnown RBP22.94■■□□□ 1.26
SSBP3-202ENST00000357475 TMEM185BQ9H7F4 350 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 QPCTLQ9NXS2 382 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 TNFRSF10DQ9UBN6 386 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 KALRNO60229 2985 aa22.94■■□□□ 1.26
SSBP3-202ENST00000357475 SMG1Q96Q15 3661 aaKnown RBP22.94■■□□□ 1.26
SSBP3-202ENST00000357475 TMED7-TICAM2A0A0A6YYA0 188 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 C7orf72A4D263 438 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 SHC1P29353 583 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 GFRA1P56159 465 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 HSF1Q00613 529 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 SPIBQ01892 262 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 NFATC3Q12968 1075 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 HMBOX1Q6NT76 420 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 ULK3Q6PHR2 472 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 CYP4Z1Q86W10 505 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 LILRA2Q8N149 483 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 PIK3C3Q8NEB9 887 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 LRTOMTQ8WZ04 291 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 DNAJA3Q96EY1 480 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 DHRS1Q96LJ7 313 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 BBC3Q96PG8 261 aaPredicted RBP22.93■■□□□ 1.26
SSBP3-202ENST00000357475 FNDC11Q9BVV2 318 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 ACKR4Q9NPB9 350 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 TMED7Q9Y3B3 224 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 RRP15Q9Y3B9 282 aaKnown RBP22.93■■□□□ 1.26
SSBP3-202ENST00000357475 ZNF337Q9Y3M9 751 aa22.93■■□□□ 1.26
SSBP3-202ENST00000357475 TMEM72A0PK05 275 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ATXN7O15265 892 aaPredicted RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 CST1P01037 141 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 PEPDP12955 493 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 POLR2HP52434 150 aaKnown RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 IST1P53990 364 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 DCST1Q5T197 706 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ZNF324BQ6AW86 544 aaPredicted RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 FAM180AQ6UWF9 173 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ATP6V1C2Q8NEY4 427 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 TMEM255BQ8WV15 326 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 SLC38A4Q969I6 547 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 SFXN2Q96NB2 322 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 SPRR3Q9UBC9 169 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ZFYVE26Q68DK2 2539 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ZC3H12DA2A288 527 aaKnown RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 H3BML4 177 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 CHP2O43745 196 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ZNF17P17021 662 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 STARP49675 285 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 GLYR1Q49A26 553 aaPredicted RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 OR2T5Q6IEZ7 315 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 LINC00114Q6XXX2 140 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 AMIGO2Q86SJ2 522 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 OR2T29Q8NH02 315 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 DNAJA4Q8WW22 397 aaPredicted RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ZNF347Q96SE7 839 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 PIGQQ9BRB3 760 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 POLR2J2Q9GZM3 115 aaKnown RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 POLR2J3Q9H1A7 115 aaKnown RBP22.92■■□□□ 1.26
SSBP3-202ENST00000357475 NTN4Q9HB63 628 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 ASF1BQ9NVP2 202 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 U3KQV3 271 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 SPTA1P02549 2419 aa22.92■■□□□ 1.26
SSBP3-202ENST00000357475 SVILO95425 2214 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 IGKV1D-42A0A075B6H8 117 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 TRBV4-1A0A0J9YWV2 114 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 IGHG3P01860 377 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 CRYABP02511 175 aaKnown RBP22.91■■□□□ 1.26
SSBP3-202ENST00000357475 H1F0P07305 194 aaKnown RBP22.91■■□□□ 1.26
SSBP3-202ENST00000357475 EIF1P41567 113 aaKnown RBP22.91■■□□□ 1.26
SSBP3-202ENST00000357475 ST3GAL3Q11203 375 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 ZFP1Q6P2D0 407 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 TBPL2Q6SJ96 375 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 STMN2Q93045 179 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 PKP2Q99959 881 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 OR11A1Q9GZK7 315 aa22.91■■□□□ 1.26
SSBP3-202ENST00000357475 A0A087WUJ7 227 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 TRGV5A0A0B4J1U4 118 aa22.9■■□□□ 1.26
SSBP3-202ENST00000357475 ELOA3DA6NLF2 546 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms