RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ABHD12BQ7Z5M8 362 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF778Q96MU6 729 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 UBQLN3Q9H347 655 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TMPRSS5Q9H3S3 457 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 A4GALTQ9NPC4 353 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 VEGFAP15692 232 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 RPL17P18621 184 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 CLDN20P56880 219 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 OR4K1Q8NGD4 311 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 RBMXL1Q96E39 390 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ABCG8Q9H221 673 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 BCO1Q9HAY6 547 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF701Q9NV72 531 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TRIM77I1YAP6 450 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TOXO94900 526 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ADORA3P0DMS8 318 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ERVK-25P63136 954 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 DOC2AQ14183 400 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 NRMQ8IXM6 262 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 CORO2AQ92828 525 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 LRRC46Q96FV0 321 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 NCR1O76036 304 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 DDAH2O95865 285 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 DPEP1P16444 411 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 RPS13P62277 151 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SFXN4Q6P4A7 337 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ZFP82Q8N141 532 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 C15orf54Q8N8G6 183 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 PEBP4Q96S96 227 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SLC30A3Q99726 388 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 PLEKHA2Q9HB19 425 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SLC2A4RGQ9NR83 387 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TAC3Q9UHF0 121 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 PHIPQ8WWQ0 1821 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SEPT4O43236 478 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 BUD23O43709 281 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 AGXTP21549 392 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 MC3RP41968 323 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ERVK-21P61565 698 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SIRPAP78324 504 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 UBL7Q96S82 380 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 HBEGFQ99075 208 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 NUDT9Q9BW91 350 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 LDAHQ9H6V9 325 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 PCDHGC4Q9Y5F7 938 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 A0A087WZY1 265 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TRABD2BA6NFA1 517 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ALPIP09923 528 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 CPN1P15169 458 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TACR3P29371 465 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF91Q05481 1191 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 EMC4Q5J8M3 183 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 MSTNO14793 375 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF765Q7L2R6 523 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 COMTD1Q86VU5 262 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 MISPQ8IVT2 679 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 NANOS1Q8WY41 292 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 OR1E3Q8WZA6 343 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 C2orf42Q9NWW7 574 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TXNL4BQ9NX01 149 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 MSRAQ9UJ68 235 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 N6AMT1Q9Y5N5 214 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 HHLA1C9JL84 531 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 GPR37L1O60883 481 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF254O75437 659 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TSPAN12O95859 305 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 STAG3L2P0CL84 134 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TGM1P22735 817 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 CAV2P51636 162 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ABLIM2Q6H8Q1 611 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 OVCH1Q7RTY7 1134 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 FAM26EQ8N5C1 309 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 OR14L1PQ8NHC6 308 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 MIB2Q96AX9 1013 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SGK3Q96BR1 496 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TRMT2BQ96GJ1 504 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF142P52746 1687 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TRAV1-2A0A0B4J238 106 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ARHGAP32A7KAX9 2087 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 EDNRBP24530 442 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 TBPL1P62380 186 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SAMD7Q7Z3H4 446 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 LILRB2Q8N423 598 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 FAM160A2Q8N612 972 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 CHRDL1Q9BU40 450 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 VNN3Q9NY84 501 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ACOT8O14734 319 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 KHNYNO15037 678 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SPDEFO95238 335 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 PFKMP08237 780 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 CNN3Q15417 329 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 CPOQ8IVL8 374 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 UHRF2Q96PU4 802 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 PLEKHA3Q9HB20 300 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 OSGIN1Q9UJX0 560 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 GMEB2Q9UKD1 530 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 A0A0G2JN53 185 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms