RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GABARAPO95166 117 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 SPDEFO95238 335 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CBX7O95931 251 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 DBHP09172 617 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ACP2P11117 423 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 SEC61A1P61619 476 aaKnown RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 MAP4K2Q12851 820 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 MLLT11Q13015 90 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 HSF5Q4G112 596 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 PDLIM3Q53GG5 364 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 FCRLBQ6BAA4 426 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ESX1Q8N693 406 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 NPWQ8N729 165 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CNEP1R1Q8N9A8 125 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 TOE1Q96GM8 510 aaKnown RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 OR7D2Q96RA2 312 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 OCSTAMPQ9BR26 566 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 SLC19A3Q9BZV2 496 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 MCOLN1Q9GZU1 580 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 SAP130Q9H0E3 1048 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 GSTO2Q9H4Y5 243 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 B3GAT1Q9P2W7 334 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 XRN1Q8IZH2 1706 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 PHRF1Q9P1Y6 1649 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 TMEM269A0A1B0GVZ9 245 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 RAB19A4D1S5 217 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC9B1P1A6NJY1 282 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 TMEM212A6NML5 194 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 GPR75O95800 540 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HBE1P02100 147 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 EDN1P05305 212 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CEBPBP17676 345 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SDC1P18827 310 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CD38P28907 300 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 TACR3P29371 465 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CA5AP35218 305 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 PTGER4P35408 488 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 NR4A2P43354 598 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 KIR2DL3P43628 341 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HOXA1P49639 335 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 ZNF140P52738 457 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 DLX5P56178 289 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 ERVK-25P63136 954 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 EEF1A2Q05639 463 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 PIN1Q13526 163 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 GGTA1PQ4G0N0 100 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 PIP5KL1Q5T9C9 394 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 ELP2Q6IA86 826 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 RBMS3Q6XE24 437 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC16A14Q7RTX9 510 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 PRR22Q8IZ63 422 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 KCTD12Q96CX2 325 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 SDSLQ96GA7 329 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 BOD1Q96IK1 185 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 FER1L6-AS2Q96M78 137 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC6A18Q96N87 628 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 RTP3Q9BQQ7 232 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 UTP23Q9BRU9 249 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 NUDT9Q9BW91 350 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 VN1R3Q9BXE9 311 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 OR52D1Q9H346 318 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 ZNF334Q9HCZ1 680 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 C1orf123Q9NWV4 160 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 GJD2Q9UKL4 321 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 ZNF281Q9Y2X9 895 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 KNDC1Q76NI1 1749 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 A0A0D9SG52 128 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 C20orf202A1L168 122 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MITFO75030 526 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 IL1AP01583 271 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HMGN2P05204 90 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 FABP1P07148 127 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 DRD5P21918 477 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 PTPN6P29350 595 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MMP12P39900 470 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HTR6P50406 440 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SSR4P51571 173 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 RAB11AP62491 216 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 PITX1P78337 314 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 ARL16Q0P5N6 197 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 COL9A3Q14050 684 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 OR1Q1Q15612 314 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 C14orf28Q4W4Y0 310 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 ENTPD8Q5MY95 495 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 IER5LQ5T953 404 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC22A25Q6T423 547 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 WDR88Q6ZMY6 472 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 RFPL4BQ6ZWI9 263 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 GRAMD2AQ8IUY3 354 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 GLB1L2Q8IW92 636 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MFSD6LQ8IWD5 586 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CNTN4Q8IWV2 1026 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 LRRC56Q8IYG6 542 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC39A11Q8N1S5 342 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 NEIL2Q969S2 332 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 PDLIM5Q96HC4 596 aaKnown RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC41A2Q96JW4 573 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC22A23A1A5C7 686 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 C4orf47A7E2U8 309 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SURF4O15260 269 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms