RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TM9SF1O15321 606 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ITM2AO43736 263 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 LYZL6O75951 148 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 OR12D1P0DN82 309 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 NID1P14543 1247 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 GGT1P19440 569 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 S100A3P33764 101 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 RYKP34925 604 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ETV4P43268 484 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 SLC1A6P48664 564 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ANXA11P50995 505 aaKnown RBP9.45□□□□□ -0.9
CAPN3-204ENST00000356316 CLNS1AP54105 237 aaKnown RBP9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF844Q08AG5 666 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 STX3Q13277 289 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 SKP2Q13309 424 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 PPA1Q15181 289 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 CLEC12BQ2HXU8 276 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 DPY19L1Q2PZI1 675 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 SYT14P1Q58G82 188 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 TMPPEQ6ZT21 453 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 MTDHQ86UE4 582 aaKnown RBP9.45□□□□□ -0.9
CAPN3-204ENST00000356316 P2RY8Q86VZ1 359 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ANKRD46Q86W74 232 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ARFGAP2Q8N6H7 521 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 PIWIL2Q8TC59 973 aaKnown RBP9.45□□□□□ -0.9
CAPN3-204ENST00000356316 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 AENQ8WTP8 325 aaKnown RBP9.45□□□□□ -0.9
CAPN3-204ENST00000356316 RAB8BQ92930 207 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ROPN1LQ96C74 230 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 PKNOX2Q96KN3 472 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 KCNK9Q9NPC2 374 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-204ENST00000356316 MARCOQ9UEW3 520 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-204ENST00000356316 PRSS50Q9UI38 385 aa9.45□□□□□ -0.9
CAPN3-204ENST00000356316 NAV3Q8IVL0 2385 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 CIB4A0PJX0 185 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 ESPNB1AK53 854 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 ETV2O00321 342 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 GPR171O14626 319 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 SMAD9O15198 467 aaKnown RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 TP53P04637 393 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 GUSBP08236 651 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 LBPP18428 481 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 HTR3AP46098 478 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 CLK1P49759 484 aaKnown RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 KHKP50053 298 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 BSPH1Q075Z2 132 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 TNK1Q13470 666 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 VEZF1Q14119 521 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 GNA13Q14344 377 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF672Q499Z4 452 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 TIMM23BQ5SRD1 257 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 TYW3Q6IPR3 259 aaKnown RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 HEPHL1Q6MZM0 1159 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 WDR93Q6P2C0 686 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 TNFAIP8L2Q6P589 184 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 GRINAQ7Z429 371 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 TRIML2Q8N7C3 387 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 IGFBPL1Q8WX77 278 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 TESCQ96BS2 214 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 RADILQ96JH8 1075 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF300Q96RE9 604 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 PAIP2Q9BPZ3 127 aaKnown RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 SLC35A5Q9BS91 424 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF350Q9GZX5 532 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 SERHL2Q9H4I8 314 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 SSU72Q9NP77 194 aaKnown RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 CISD1Q9NZ45 108 aaKnown RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 LIPT1Q9Y234 373 aa9.44□□□□□ -0.9
CAPN3-204ENST00000356316 NOSIPQ9Y314 301 aaKnown RBP9.44□□□□□ -0.9
CAPN3-204ENST00000356316 DPRXA6NFQ7 191 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 CCT8L1PA6NM43 557 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 DNAJA2O60884 412 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 MRPL33O75394 65 aaKnown RBP9.43□□□□□ -0.9
CAPN3-204ENST00000356316 H6PDO95479 791 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 UQCRBP14927 111 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 CCNA2P20248 432 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 PGM1P36871 562 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 MAGEA8P43361 318 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 IDH2P48735 452 aaKnown RBP9.43□□□□□ -0.9
CAPN3-204ENST00000356316 OR2B6P58173 313 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 KCNJ10P78508 379 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 LRRC74AQ0VAA2 488 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 FAPQ12884 760 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 CASP8Q14790 479 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 PDK3Q15120 406 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 MAPK14Q16539 360 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 FAM174BQ3ZCQ3 159 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 AGAP6Q5VW22 663 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 FBXW9Q5XUX1 488 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 SAXO2Q658L1 398 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 KLHL17Q6TDP4 642 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 DNAJC14Q6Y2X3 702 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF621Q6ZSS3 439 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 OLIG3Q7RTU3 272 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.43□□□□□ -0.9
CAPN3-204ENST00000356316 CROCCP2Q86T23 111 aa9.43□□□□□ -0.9
CAPN3-204ENST00000356316 LRRC34Q8IZ02 419 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms