RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 CDK4P11802 303 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 MBTPS1Q14703 1052 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 PTPRCAPQ14761 206 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 COL5A1-AS1Q5SY13 56 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 DCP2Q8IU60 420 aaKnown RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 TMEM239Q8WW34 195 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 DYRK2Q92630 601 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CDS1Q92903 461 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 ATP13A2Q9NQ11 1180 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 SPEF2Q9C093 1822 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 FAM186AA6NE01 2351 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 ELLP55199 621 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 GGNBP1Q5YKI7 109 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 EPGNQ6UW88 154 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 OR52P1PQ8NH57 321 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 PIGCQ92535 297 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 MCOLN1Q9GZU1 580 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 NLE1Q9NVX2 485 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 DEPDC5O75140 1603 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 BAZ2AQ9UIF9 1905 aaKnown RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 TRAV34A0A0B4J273 112 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 PMS2P1A4D2B8 440 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 A6NCN8 305 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 LRIT2A6NDA9 550 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 A8MT66 165 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 EIF3FO00303 357 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 HPRP00739 348 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 GDI1P31150 447 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 DMWDQ09019 674 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 RFTN1Q14699 578 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CLEC12BQ2HXU8 276 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 SIRPB2Q5JXA9 342 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 ZFYVE21Q9BQ24 234 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CMSS1Q9BQ75 279 aaKnown RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 NDFIP1Q9BT67 221 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 OR10A5Q9H207 317 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 OR10A2Q9H208 303 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 P4HTMQ9NXG6 502 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF860A6NHJ4 632 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 PDGFBP01127 241 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CRYBB1P53674 252 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 GNB1P62873 340 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 NHLH1Q02575 133 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 NHLH2Q02577 135 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 HES1Q14469 280 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 LYPD4Q6UWN0 246 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 SECTM1Q8WVN6 248 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 EXTL1Q92935 676 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 HCAR1Q9BXC0 346 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CWH43Q9H720 699 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CEP170BQ9Y4F5 1589 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CALCRP30988 508 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 TGFBR1P36897 503 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 B2MP61769 119 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 TMUB2Q71RG4 321 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 BPIFB2Q8N4F0 458 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 LMNTD1Q8N9Z9 388 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 MOCOSQ96EN8 888 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 FCRL1Q96LA6 429 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 P2RX7Q99572 595 aaKnown RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 FAM221BA6H8Z2 402 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 SOCS5O75159 536 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 EBLN1P0CF75 366 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 SFTPDP35247 375 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 GLYR1Q49A26 553 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 RTL6Q6ICC9 239 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 Q6ZRG5 221 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 IRF2BP2Q7Z5L9 587 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 ARL14EPQ8N8R7 260 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 OR5B2Q96R09 309 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CD244Q9BZW8 370 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 IL17RBQ9NRM6 502 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 SUSD2Q9UGT4 822 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 JCADQ9P266 1359 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 DUSP11O75319 330 aaKnown RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 NQO2P16083 231 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 CLCNKBP51801 687 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF280AP59817 542 aaPredicted RBP7.57□□□□□ -1.2
SCN8A-201ENST00000354534 FAM182AQ5T1J6 154 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 PRSS48Q7RTY5 328 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 C14orf80Q86SX3 495 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 NUP37Q8NFH4 326 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 PPTC7Q8NI37 304 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 IL25Q9H293 177 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 POLLQ9UGP5 575 aa7.57□□□□□ -1.2
SCN8A-201ENST00000354534 ATRXP46100 2492 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 DDTLA6NHG4 134 aaPredicted RBP7.56□□□□□ -1.2
SCN8A-201ENST00000354534 REEP5Q00765 189 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 ZNF266Q14584 549 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 FAM162BQ5T6X4 162 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 PRAMEF8Q5VWM4 474 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 PRAMEF7Q5VXH5 474 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 DHRS7BQ6IAN0 325 aaPredicted RBP7.56□□□□□ -1.2
SCN8A-201ENST00000354534 GKN2Q86XP6 184 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 OR8J2Q8NGG1 315 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 EDEM2Q9BV94 578 aa7.56□□□□□ -1.2
SCN8A-201ENST00000354534 KLF11O14901 512 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms