RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TLX1P31314 330 aaPredicted RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 NAA10P41227 235 aaPredicted RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 ANKRD54Q6NXT1 300 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 FIGLAQ6QHK4 219 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 SIAH3Q8IW03 269 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 LRRC17Q8N6Y2 441 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 SDR9C7Q8NEX9 313 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 TOR1AIP2Q8NFQ8 470 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 GCDHQ92947 438 aaPredicted RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 MED28Q9H204 178 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 MRPL15Q9P015 296 aaKnown RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 TEKT2Q9UIF3 430 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 SLC35A3Q9Y2D2 325 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 SLC22A31A6NKX4 558 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 TNFRSF10AO00220 468 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 AGR2O95994 175 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 TFP02787 698 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 UGT2B7P16662 529 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 POU3F3P20264 500 aaPredicted RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 RPS4Y1P22090 263 aaKnown RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 SLC2A5P22732 501 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 EMDP50402 254 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF776Q68DI1 518 aaPredicted RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 TMPRSS11FQ6ZWK6 438 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 PXKQ7Z7A4 578 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 CDK20Q8IZL9 346 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 C9orf62Q8N4C0 152 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 OR52E2Q8NGJ4 325 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 NT5CQ8TCD5 201 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 GSDMCQ9BYG8 508 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 RBCK1Q9BYM8 510 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 SLCO1C1Q9NYB5 712 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 AK6Q9Y3D8 172 aaKnown RBP16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 DENND4AQ7Z401 1863 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 PRUNE2Q8WUY3 3088 aa16.7■□□□□ 0.26
PTP4A3-202ENST00000349124 OR2W5A6NFC9 320 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 H0YGG7 62 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 K7EQS6 105 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PSMD9O00233 223 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 TRIM3O75382 744 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 SC5DO75845 299 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ADRB1P08588 477 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 SRP54P61011 504 aaKnown RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ARF3P61204 181 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 FHL1Q13642 323 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 DMKNQ6E0U4 476 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 RNF113BQ8IZP6 322 aaKnown RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 FAM3CQ92520 227 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PHF11Q9UIL8 331 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ARHGEF17Q96PE2 2063 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 A0A087WV48 116 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 A0A1B0GWA3 101 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 RIIAD1A6NNX1 92 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 RASGRP1O95267 797 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 CA3P07451 260 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ENPP2Q13822 863 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 NDUFAF6Q330K2 333 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF655Q8N720 491 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PDCD1LG2Q9BQ51 273 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF559Q9BR84 538 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 GHITMQ9H3K2 345 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 MCCC2Q9HCC0 563 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 EVA1BQ9NVM1 165 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PILRAQ9UKJ1 303 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 IDSB3KWA1 339 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PLRG1O43660 514 aaKnown RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 TCRBP04435 133 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 HK1P19367 917 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 RAB3BP20337 219 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 RBMS1P29558 406 aaKnown RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PSMB10P40306 273 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 MGAT2Q10469 447 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 CLPPQ16740 277 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 TMEM196Q5HYL7 178 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF761Q86XN6 746 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 YAF2Q8IY57 180 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 OR8H1Q8NGG4 311 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PCNPQ8WW12 178 aaKnown RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 THAP4Q8WY91 577 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 FGF14Q92915 247 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 YIPF5Q969M3 257 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ERMAPQ96PL5 475 aaPredicted RBP16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ST6GALNAC2Q9UJ37 374 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 MGAT4AQ9UM21 535 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 ADAM18Q9Y3Q7 739 aa16.69■□□□□ 0.26
PTP4A3-202ENST00000349124 PRKNO60260 465 aaPredicted RBP16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 MT-ND4P03905 459 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 HIST1H1CP16403 213 aaKnown RBP16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 COL9A1P20849 921 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 KIR2DL1P43626 348 aaPredicted RBP16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 P2RX3P56373 397 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 PPP1CAP62136 330 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 GPM6BQ13491 265 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 PRICKLE4Q2TBC4 344 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 CEP78Q5JTW2 689 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 PARM1Q6UWI2 310 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF687Q8N1G0 1237 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 BRD7Q9NPI1 651 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 HRKO00198 91 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 DRD5P21918 477 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms