RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TVP23BQ9NYZ1 205 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 NDUFA13Q9P0J0 144 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 FBXL4Q9UKA2 621 aa17.04■□□□□ 0.32
PTN-201ENST00000348225 PTGES3LE9PB15 166 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 M0R129 80 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 TERTO14746 1132 aaKnown RBP17.03■□□□□ 0.32
PTN-201ENST00000348225 GNB5O14775 395 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 CDC40O60508 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTN-201ENST00000348225 HCN1O60741 890 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 MRPS14O60783 128 aaKnown RBP17.03■□□□□ 0.32
PTN-201ENST00000348225 IGF2P01344 180 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 GP1BBP13224 206 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 CEACAM1P13688 526 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 BMP7P18075 431 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 RBMS1P29558 406 aaKnown RBP17.03■□□□□ 0.32
PTN-201ENST00000348225 PCYT1AP49585 367 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 OR2T33Q8NG76 320 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 SGTBQ96EQ0 304 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 ADAM19Q9H013 955 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 DUSP21Q9H596 190 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 SMIM31A0A1B0GVY4 71 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 GMFGO60234 142 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 SOX3P41225 446 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 SSR4P51571 173 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 SLC35A2P78381 396 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 ZNF791Q3KP31 576 aaPredicted RBP17.03■□□□□ 0.32
PTN-201ENST00000348225 NADK2Q4G0N4 442 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 CLEC12AQ5QGZ9 265 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 ACSM5Q6NUN0 579 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 MRGPREQ86SM8 312 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 SATL1Q86VE3 508 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 SLC43A2Q8N370 569 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 GALNT15Q8N3T1 639 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 OR10G3Q8NGC4 313 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 ASB15Q8WXK1 588 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 OR52D1Q9H346 318 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 P4HTMQ9NXG6 502 aa17.03■□□□□ 0.32
PTN-201ENST00000348225 LOC101059948A0A1B0GTJ6 334 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 ANKUB1A6NFN9 424 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.02■□□□□ 0.31
PTN-201ENST00000348225 ADAM10O14672 748 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 MST1P26927 711 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 TACR3P29371 465 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 ALDH3B2P48448 385 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 SLC9A3P48764 834 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 CHAF1BQ13112 559 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 SNAPC1Q16533 368 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 COL28A1Q2UY09 1125 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 PGGHGQ32M88 737 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 TMEM201Q5SNT2 666 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 SMARCD3Q6STE5 483 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 KCTD8Q6ZWB6 473 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 OAFQ86UD1 273 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 RPS19BP1Q86WX3 136 aaKnown RBP17.02■□□□□ 0.31
PTN-201ENST00000348225 CYP4Z2PQ8N1L4 340 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 ARMC10Q8N2F6 343 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 TCEANCQ8N8B7 351 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 OR13C2Q8NGS9 318 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 GPR119Q8TDV5 335 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 TMEM234Q8WY98 164 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 SAMD8Q96LT4 415 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 IL4I1Q96RQ9 567 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 CDCP1Q9H5V8 836 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 PAK1IP1Q9NWT1 392 aaPredicted RBP17.02■□□□□ 0.31
PTN-201ENST00000348225 TAS2R10Q9NYW0 307 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 PPP4R1LQ9P1A2 415 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 PCDHGB6Q9Y5F9 930 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 MUC6Q6W4X9 2439 aa17.02■□□□□ 0.31
PTN-201ENST00000348225 RGS10O43665 173 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 HMGN1P05114 100 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 SERPINA7P05543 415 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 F8A1P23610 371 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 MSX1P28360 303 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 NOVA1P51513 510 aaKnown RBP17.01■□□□□ 0.31
PTN-201ENST00000348225 GAS1P54826 345 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 MLF1P58340 268 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 QPRTQ15274 297 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 MEDAGQ5VYS4 303 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 SPARTQ8N0X7 666 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 MYDGFQ969H8 173 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 PLEKHA8Q96JA3 519 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 SECISBP2Q96T21 854 aaKnown RBP17.01■□□□□ 0.31
PTN-201ENST00000348225 CCDC90BQ9GZT6 254 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 PSORS1C1Q9UIG5 152 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 SIGLEC7Q9Y286 467 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 WIF1Q9Y5W5 379 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 KNTC1P50748 2209 aa17.01■□□□□ 0.31
PTN-201ENST00000348225 CLCA1A8K7I4 914 aa17■□□□□ 0.31
PTN-201ENST00000348225 C17orf51A8MQB3 221 aa17■□□□□ 0.31
PTN-201ENST00000348225 FUT1P19526 365 aa17■□□□□ 0.31
PTN-201ENST00000348225 CXCR1P25024 350 aa17■□□□□ 0.31
PTN-201ENST00000348225 HTR3AP46098 478 aa17■□□□□ 0.31
PTN-201ENST00000348225 POLR2HP52434 150 aaKnown RBP17■□□□□ 0.31
PTN-201ENST00000348225 SNTA1Q13424 505 aa17■□□□□ 0.31
PTN-201ENST00000348225 IL10RAQ13651 578 aa17■□□□□ 0.31
PTN-201ENST00000348225 OCLNQ16625 522 aa17■□□□□ 0.31
PTN-201ENST00000348225 SLC25A30Q5SVS4 291 aa17■□□□□ 0.31
PTN-201ENST00000348225 SLC30A6Q6NXT4 461 aa17■□□□□ 0.31
PTN-201ENST00000348225 AHSA2Q719I0 299 aa17■□□□□ 0.31
PTN-201ENST00000348225 GRINAQ7Z429 371 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms