RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 RASD1Q9Y272 281 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 A0A1B0GWA3 101 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 A0A1W2PRG6 482 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GPR89AB7ZAQ6 455 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 FAM47E-STBD1D6RA91 191 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 J3QLW9 94 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 DCTN6O00399 190 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 RGS13O14921 159 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GMFGO60234 142 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 BRINP1O60477 761 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 OR5F1O95221 314 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ATP1B1P05026 303 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GPR89BP0CG08 455 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF19P17023 458 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 MAOAP21397 527 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 MAOBP27338 520 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 PSMB10P40306 273 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 SLC16A1P53985 500 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 RPS15AP62244 130 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 EIF2B5Q13144 721 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GNA13Q14344 377 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 NDUFA9Q16795 377 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 COL13A1Q5TAT6 717 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 DDI2Q5TDH0 399 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 KIRREL2Q6UWL6 708 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 KIAA1324Q6UXG2 1013 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 KANSL1Q7Z3B3 1105 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF619Q8N2I2 560 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 LNX2Q8N448 690 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF614Q8N883 585 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GATSQ8NAP1 163 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 NBEAQ8NFP9 2946 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 OSTF1Q92882 214 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ELSPBP1Q96BH3 223 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 EFHD2Q96C19 240 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 SIPA1Q96FS4 1042 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 CYYR1Q96J86 154 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 HS6ST2Q96MM7 605 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 BABAM2Q9NXR7 383 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 DNAJB12Q9NXW2 375 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 OBP2AQ9NY56 170 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 SLCO1C1Q9NYB5 712 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 HCN3Q9P1Z3 774 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ST6GALNAC2Q9UJ37 374 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 PCOLCE2Q9UKZ9 415 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 EXOSC1Q9Y3B2 195 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 A0A0A6YYC8 382 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 A0A0B4J2E0 115 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 A0A1B0GX12 115 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 HMX3A6NHT5 357 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 I3L1I5 382 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 PIN1P1O15428 100 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GALR3O60755 368 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 SNRPBP14678 240 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GABRG2P18507 467 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 DRD5P21918 477 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ARFIP1P53367 373 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 NANOS3P60323 173 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GPLD1P80108 840 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ACSM1Q08AH1 577 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 DSG2Q14126 1118 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 GPR176Q14439 515 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 CDK10Q15131 360 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 PRAMEF8Q5VWM4 474 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 PRAMEF7Q5VXH5 474 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 RRM2BQ7LG56 351 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 WDFY1Q8IWB7 410 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 YAF2Q8IY57 180 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 VWA5B2Q8N398 1253 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 RCBTB1Q8NDN9 531 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 OR11H4Q8NGC9 324 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 OR4K13Q8NH42 304 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 CEP76Q8TAP6 659 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ABHD4Q8TB40 342 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 BAHD1Q8TBE0 780 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 BRIX1Q8TDN6 353 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 RLN3Q8WXF3 142 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 TMCO6Q96DC7 493 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 DDOQ99489 341 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 SPATA5L1Q9BVQ7 753 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 IFT27Q9BW83 186 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 DDX28Q9NUL7 540 aaKnown RBP5.56□□□□□ -1.52
CLCN3-201ENST00000347613 HRASLS2Q9NWW9 162 aa5.56□□□□□ -1.52
CLCN3-201ENST00000347613 ANKRD34BA5PLL1 514 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 TRAPPC13A5PLN9 417 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 C10orf142B7Z368 130 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SELENOFO60613 162 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SOX30O94993 753 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SBK2P0C263 348 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CT45A8P0DMV1 189 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CT45A9P0DMV2 189 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ATF1P18846 271 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CXCL3P19876 107 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 NAA10P41227 235 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 RUNX1T1Q06455 604 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SCN1BQ07699 218 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 GALEQ14376 348 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 KCNAB1Q14722 419 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CT45A2Q5DJT8 189 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 GARNL3Q5VVW2 1013 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms