RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SDR9C7Q8NEX9 313 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 LRFN5Q96NI6 719 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF700Q9H0M5 742 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CENPMQ9NSP4 180 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 POT1Q9NUX5 634 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 A0A1B0GUH1 482 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 EEF1E1-BLOC1S5C9J1V9 151 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 H2BFMP0C1H6 154 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 MASP1P48740 699 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 PDGFRLQ15198 375 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 Q499Y3 187 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CDH26Q8IXH8 852 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR9A2Q8NGT5 310 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SLC2A12Q8TD20 617 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 C12orf57Q99622 126 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SRA1Q9HD15 236 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 V9GYH0 126 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 PLXNA1Q9UIW2 1896 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 AKR7A2O43488 359 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GYPBP06028 91 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CTRB1P17538 263 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 AKT2P31751 481 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 HSD11B2P80365 405 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 STK11Q15831 433 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CTRB2Q6GPI1 263 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 LEG1Q6P5S2 330 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SGPP2Q8IWX5 399 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CLRN3Q8NCR9 226 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 PDXPQ96GD0 296 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZC3HAV1LQ96H79 300 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 KLF16Q9BXK1 252 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GAREM1Q9H706 876 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SIPA1L1O43166 1804 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TSC2P49815 1807 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 A6NIN4 97 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 IMPA2O14732 288 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 KHNYNO15037 678 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TNFP01375 233 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 IMPA1P29218 277 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CAMLGP49069 296 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CHAF1BQ13112 559 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SMUG1Q53HV7 270 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 VRK2Q86Y07 508 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 PRDM9Q9NQV7 894 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF638Q14966 1978 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 LEUTXA8MZ59 168 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 IFNA2P01563 188 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GABRB1P18505 474 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 HOXD9P28356 352 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ACTR1BP42025 376 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 KIAA1024LP59773 190 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ACTR1AP61163 376 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF585AQ6P3V2 769 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GPAT4Q86UL3 456 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CARS2Q9HA77 564 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 HHATLQ9HCP6 504 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CLEC4EQ9ULY5 219 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SLC35A3Q9Y2D2 325 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 A0A1W2PQ45 241 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 A0A1W2PQY0 241 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 C2orf74A8MZ97 194 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 IFNGR1P15260 489 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 MMP11P24347 488 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 EPHA2P29317 976 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ECI1P42126 302 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SLC35D3Q5M8T2 416 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CNKSR3Q6P9H4 555 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 LINC01465Q8N7H1 131 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 STEAP2Q8NFT2 490 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 HMGCLL1Q8TB92 370 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SLC22A11Q9NSA0 550 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 USP36Q9P275 1121 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OIP5O43482 229 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 FCER2P06734 321 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GALTP07902 379 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF8P17098 575 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 PTPRRQ15256 657 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 C1orf94Q6P1W5 598 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TTC9BQ8N6N2 239 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR7G2Q8NG99 324 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ADAMTS18Q8TE60 1221 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GAL3ST4Q96RP7 486 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SERTM1A2A2V5 107 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF726A6NNF4 738 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SMAD6O43541 496 aaKnown RBP4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR2F2O95006 317 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CRYBB2P43320 205 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TAS2R20P59543 309 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR2F1Q13607 317 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 OR1Q1Q15612 314 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 ACTBL2Q562R1 376 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 CDRT4Q8N9R6 151 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SLC19A3Q9BZV2 496 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 EPHX3Q9H6B9 360 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 TAAR2Q9P1P5 351 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SURF4O15260 269 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 MAOBP27338 520 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SORDQ00796 357 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 GAB1Q13480 694 aa4.47□□□□□ -1.69
CSMD3-203ENST00000343508 SOWAHCQ53LP3 525 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms