RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NXPE2Q96DL1 559 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SEMA4GQ9NTN9 838 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 RABL2AQ9UBK7 228 aaPredicted RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 RABL2BQ9UNT1 228 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PPIL1Q9Y3C6 166 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 NUBP2Q9Y5Y2 271 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PHYHO14832 338 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 GATBO75879 557 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 PTGS2P35354 604 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SIRPAP78324 504 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 GALK2Q01415 458 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 GBX1Q14549 363 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SGCAQ16586 387 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 C1orf94Q6P1W5 598 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 LILRA6Q6PI73 481 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 BTLAQ7Z6A9 289 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PLXDC1Q8IUK5 500 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SLC7A6Q92536 515 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 CCDC120Q96HB5 630 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SHDQ96IW2 340 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 KATNB1Q9BVA0 655 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 BCL2L10Q9HD36 194 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 HINT3Q9NQE9 182 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 GSKIPQ9P0R6 139 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 UGT2A1Q9Y4X1 527 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SHANK3Q9BYB0 1731 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 THSD7AQ9UPZ6 1657 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ACOT7O00154 380 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 F13BP05160 661 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 OR8G3PP0DMU2 310 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 DUSP5Q16690 384 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 CDNFQ49AH0 187 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ABCA11PQ4W5N1 156 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SLC6A19Q695T7 634 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 RAB12Q6IQ22 244 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 TMEM205Q6UW68 189 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SPAG16Q8N0X2 631 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 CNOT9Q92600 299 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 HIST1H2AAQ96QV6 131 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 LMF2Q9BU23 707 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 SYT4Q9H2B2 425 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SLA2Q9H6Q3 261 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 UBQLN4Q9NRR5 601 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PPP4R1LQ9P1A2 415 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 RCE1Q9Y256 329 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ADAMTSL1Q8N6G6 1762 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 POM121BA6NF01 834 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 NAP1L6A6NFF2 107 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 MEN1O00255 615 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 TP53I11O14683 189 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SULT1C4O75897 302 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 CHRM4P08173 479 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 UBL4AP11441 157 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ETV5P41161 510 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ETV1P50549 477 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 EMP3P54852 163 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PCGF3Q3KNV8 242 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PRSS36Q5K4E3 855 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 KIAA1211LQ6NV74 962 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 BEST3Q8N1M1 668 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ABHD4Q8TB40 342 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 OPALINQ96PE5 141 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SLC6A7Q99884 636 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 KIR3DX1Q9H7L2 352 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 MBD1Q9UIS9 605 aaPredicted RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 DAPP1Q9UN19 280 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 LOXHD1Q8IVV2 1947 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 RP1P56715 2156 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 VSTM2BA6NLU5 285 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 MAN2B1O00754 1011 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SRPX2O60687 465 aaPredicted RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 MRPS10P82664 201 aaKnown RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 METTL11BQ5VVY1 283 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PRAMEF8Q5VWM4 474 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 PRAMEF7Q5VXH5 474 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 FCRLAQ7L513 359 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 NAXEQ8NCW5 288 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 HAVCR2Q8TDQ0 301 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SLC35B4Q969S0 331 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 CNRIP1Q96F85 164 aaPredicted RBP6.69□□□□□ -1.34
VCAN-202ENST00000342785 INTS14Q96SY0 518 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 SLC6A17Q9H1V8 727 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 ALG5Q9Y673 324 aa6.69□□□□□ -1.34
VCAN-202ENST00000342785 KCNE1BA0A087WTH5 132 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 SLC16A7O60669 478 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 VNN2O95498 520 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 TFP02787 698 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 SYPP08247 313 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 LBX1P52954 281 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CLDN12P56749 244 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 MFSD13AQ14CX5 517 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 ALKBH2Q6NS38 261 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 SFXN4Q6P4A7 337 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 RNF165Q6ZSG1 346 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 OR5T3Q8NGG3 340 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 LILRB4Q8NHJ6 448 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 BRIX1Q8TDN6 353 aaKnown RBP6.68□□□□□ -1.34
VCAN-202ENST00000342785 BMFQ96LC9 184 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 NMNAT3Q96T66 252 aa6.68□□□□□ -1.34
VCAN-202ENST00000342785 CHST8Q9H2A9 424 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms