RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 TMEM240Q5SV17 173 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 PRAMEF17Q5VTA0 474 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ZNF613Q6PF04 617 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RNF165Q6ZSG1 346 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RIT1Q92963 219 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 MS4A4EQ96PG1 132 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 GINS4Q9BRT9 223 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 PBX4Q9BYU1 374 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ZMAT3Q9HA38 289 aaKnown RBP11.63□□□□□ -0.55
LMX1A-202ENST00000342310 CDH10Q9Y6N8 788 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RNF13O43567 381 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 CPEP16870 476 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 FAPQ12884 760 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
LMX1A-202ENST00000342310 PON3Q15166 354 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 TMEM35AQ53FP2 167 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 C3orf38Q5JPI3 329 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 GPR155Q7Z3F1 870 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 KDM8Q8N371 416 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 LNX2Q8N448 690 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 MEIOBQ8N635 442 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 HHIPQ96QV1 700 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 EPHX3Q9H6B9 360 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 LIPT1Q9Y234 373 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ANAPC1Q9H1A4 1944 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 EIF1AYO14602 144 aaKnown RBP11.63□□□□□ -0.55
LMX1A-202ENST00000342310 SELENOFO60613 162 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RGS9O75916 674 aaPredicted RBP11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RCBTB2O95199 551 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 GPANK1O95872 356 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RAB3BP20337 219 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 MAOAP21397 527 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 AKR1D1P51857 326 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ARHGDIBP52566 201 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 GPR176Q14439 515 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ARHGAP19Q14CB8 494 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 LRRC37A5PQ49AS3 106 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ETFBKMTQ8IXQ9 262 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 NATD1Q8N6N6 113 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 CLDN22Q8N7P3 220 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 TMEM52Q8NDY8 209 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 OR2T35Q8NGX2 323 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 CEP76Q8TAP6 659 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RSC1A1Q92681 617 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ARHGAP9Q9BRR9 750 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 AUNIPQ9H7T9 357 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RBFOX1Q9NWB1 397 aaKnown RBP11.63□□□□□ -0.55
LMX1A-202ENST00000342310 RDH8Q9NYR8 311 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ACTR10Q9NZ32 417 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 ZNF69Q9UC07 566 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 KCND3Q9UK17 655 aa11.63□□□□□ -0.55
LMX1A-202ENST00000342310 SURF4O15260 269 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 IFNGP01579 166 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 HNRNPA1P09651 372 aaKnown RBP eCLIP11.62□□□□□ -0.55
LMX1A-202ENST00000342310 CT62P0C5K7 136 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 OR8G3PP0DMU2 310 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 OR3A3P47888 321 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 BTG2P78543 158 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 DPTQ07507 201 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 ENPP2Q13822 863 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 OCLNQ16625 522 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 YOD1Q5VVQ6 348 aaPredicted RBP11.62□□□□□ -0.55
LMX1A-202ENST00000342310 WDR88Q6ZMY6 472 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 Q6ZSR6 202 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 VN1R4Q7Z5H5 301 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 UBE2Q1Q7Z7E8 422 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
LMX1A-202ENST00000342310 OR6N2Q8NGY6 317 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 THAP4Q8WY91 577 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 LMF1Q96S06 567 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 TEAD3Q99594 435 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 ERVK-19Q9WJR5 959 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 TMEM5Q9Y2B1 443 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 FKBP7Q9Y680 259 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 TCRBV21S2A2A0A5A6 115 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 C2orf72A6NCS6 295 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 FLRT2O43155 660 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 OR6A2O95222 327 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 UGT2B7P16662 529 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 C5AR1P21730 350 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 PTGS2P35354 604 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 LIMS1P48059 325 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 GAS6Q14393 721 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.62□□□□□ -0.55
LMX1A-202ENST00000342310 GFOD2Q3B7J2 385 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 AKIRIN2Q53H80 203 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 GDPGP1Q6ZNW5 385 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 RASSF6Q6ZTQ3 369 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 SLC35D2Q76EJ3 337 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 ZNF676Q8N7Q3 588 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 AKAP1Q92667 903 aaKnown RBP eCLIP11.62□□□□□ -0.55
LMX1A-202ENST00000342310 RAB7BQ96AH8 199 aa11.62□□□□□ -0.55
LMX1A-202ENST00000342310 TSPAN10Q9H1Z9 355 aaPredicted RBP11.62□□□□□ -0.55
LMX1A-202ENST00000342310 A0A1B0GWA3 101 aa11.61□□□□□ -0.55
LMX1A-202ENST00000342310 FAM25EA8MYX2 175 aa11.61□□□□□ -0.55
LMX1A-202ENST00000342310 ERVH48-1M5A8F1 160 aa11.61□□□□□ -0.55
LMX1A-202ENST00000342310 FZD7O75084 574 aa11.61□□□□□ -0.55
LMX1A-202ENST00000342310 KDM4BO94953 1096 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms