RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 KLK2P20151 261 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 CD247P20963 164 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 CHMP24386 653 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 PSMA4P25789 261 aaKnown RBP11.89□□□□□ -0.51
TUBD1-202ENST00000340993 SLC7A1P30825 629 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 CPOXP36551 454 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 YAP1P46937 504 aaKnown RBP11.89□□□□□ -0.51
TUBD1-202ENST00000340993 SLC6A8P48029 635 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 ADORA2A-AS1P86434 159 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 TMEM44Q2T9K0 475 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 NHSL2Q5HYW2 709 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 DHRS4L2Q6PKH6 230 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 DEF8Q6ZN54 512 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 ZNF550Q7Z398 422 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 P4HA3Q7Z4N8 544 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 GRAMD2AQ8IUY3 354 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 OR6T1Q8NGN1 323 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 TMEM234Q8WY98 164 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 PRDM14Q9GZV8 571 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 EXOSC3Q9NQT5 275 aaKnown RBP11.89□□□□□ -0.51
TUBD1-202ENST00000340993 ACER3Q9NUN7 267 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 KLHL28Q9NXS3 571 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 RPS6KB2Q9UBS0 482 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 CLEC4AQ9UMR7 237 aa11.89□□□□□ -0.51
TUBD1-202ENST00000340993 MRPS18CQ9Y3D5 142 aaKnown RBP11.89□□□□□ -0.51
TUBD1-202ENST00000340993 NCOA6Q14686 2063 aaPredicted RBP11.88□□□□□ -0.51
TUBD1-202ENST00000340993 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 TMEM72A0PK05 275 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 ZC3H12DA2A288 527 aaKnown RBP11.88□□□□□ -0.51
TUBD1-202ENST00000340993 TPST2O60704 377 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 TGM6O95932 706 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 GLI4P10075 376 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 UQCRBP14927 111 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 KDELR2P33947 212 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 EIF1P41567 113 aaKnown RBP11.88□□□□□ -0.51
TUBD1-202ENST00000340993 ERFP50548 548 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 ZNF136P52737 540 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 PER3P56645 1201 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 EEFSECP57772 596 aaKnown RBP11.88□□□□□ -0.51
TUBD1-202ENST00000340993 PON3Q15166 354 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 CDSNQ15517 529 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 HBMQ6B0K9 141 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 CYP2R1Q6VVX0 501 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 SEM1Q6ZVN7 128 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 SLC30A8Q8IWU4 369 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 PM20D2Q8IYS1 436 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 C9orf106Q8NAJ2 232 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 TNIP2Q8NFZ5 429 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 OR52E4Q8NGH9 312 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 OR10D3Q8NH80 312 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 FNDC9Q8TBE3 224 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 ROBO4Q8WZ75 1007 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 ST8SIA1Q92185 356 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 MRGPRX4Q96LA9 322 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 TTYH2Q9BSA4 534 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 SRXN1Q9BYN0 137 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 OSGIN1Q9UJX0 560 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
TUBD1-202ENST00000340993 A0A1B0GUH1 482 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 FAM90A27PA6NNH2 459 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 WDR1O75083 606 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 KCNJ5P48544 419 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 MNAT1P51948 309 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 RAC1P63000 192 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 SELENBP1Q13228 472 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 CEACAM7Q14002 265 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 NPTX1Q15818 432 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 GLYATQ6IB77 296 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 GRINAQ7Z429 371 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 CARM1Q86X55 608 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 ZNF440Q8IYI8 595 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 PROX1Q92786 737 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 PMM1Q92871 262 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 SDCCAG3Q96C92 435 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 ARL5BQ96KC2 179 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 KLHL15Q96M94 604 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 MCHR1Q99705 422 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 THTPAQ9BU02 230 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 CHRNA9Q9UGM1 479 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 AP4B1Q9Y6B7 739 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 USP9YO00507 2555 aaPredicted RBP11.87□□□□□ -0.51
TUBD1-202ENST00000340993 A0A1B0GWA3 101 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 E9PLN8 166 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 LGI1O95970 557 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 CBLP22681 906 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 CXCR1P25024 350 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 SLC1A3P43003 542 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
TUBD1-202ENST00000340993 SIRPAP78324 504 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 VEZF1Q14119 521 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 OR1Q1Q15612 314 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 CTU2Q2VPK5 515 aaKnown RBP11.87□□□□□ -0.51
TUBD1-202ENST00000340993 GLYR1Q49A26 553 aaPredicted RBP11.87□□□□□ -0.51
TUBD1-202ENST00000340993 SAMD4BQ5PRF9 694 aaKnown RBP11.87□□□□□ -0.51
TUBD1-202ENST00000340993 AP1ARQ63HQ0 302 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 WBP2NLQ6ICG8 309 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 C3orf33Q6P1S2 294 aa11.87□□□□□ -0.51
TUBD1-202ENST00000340993 FKBP9P1Q75LS8 142 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms