RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 GAL3ST1Q99999 423 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 MRPL37Q9BZE1 423 aaKnown RBP9.31□□□□□ -0.92
ATXN3-201ENST00000340660 MS4A5Q9H3V2 200 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 NT5DC2Q9H857 520 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 TIGARQ9NQ88 270 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 SLC7A10Q9NS82 523 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 DDX56Q9NY93 547 aaKnown RBP9.31□□□□□ -0.92
ATXN3-201ENST00000340660 ZNF490Q9ULM2 529 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-201ENST00000340660 SIGLEC9Q9Y336 463 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 KCNE2Q9Y6J6 123 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 IGLV3-32A0A0A0MS00 114 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 A0A1W2PR48 441 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 APOC4-APOC2K7ER74 178 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 SAP18O00422 153 aaKnown RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 NME6O75414 186 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 APOC2P02655 101 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 PPIAL4GP0DN37 164 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 ME2P23368 584 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 NMBRP28336 390 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 EMDP50402 254 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 PNLIPRP2P54317 469 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 MAD2L1BPQ15013 274 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 AP5B1Q2VPB7 878 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 REP15Q6BDI9 236 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 MRNIPQ6NTE8 343 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 ANKRD16Q6P6B7 361 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 NPSR1Q6W5P4 371 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 RAPH1Q70E73 1250 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 MARCH3Q86UD3 253 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 C1orf162Q8NEQ5 155 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 ACTL9Q8TC94 416 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 MS4A8Q9BY19 250 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 SDHAF3Q9NRP4 125 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 IARS2Q9NSE4 1012 aaKnown RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 INTS10Q9NVR2 710 aaKnown RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 SLC17A7Q9P2U7 560 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 UVRAGQ9P2Y5 699 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 ZNF639Q9UID6 485 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 PHF11Q9UIL8 331 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 LSM4Q9Y4Z0 139 aaKnown RBP9.3□□□□□ -0.92
ATXN3-201ENST00000340660 MAD1L1Q9Y6D9 718 aa9.3□□□□□ -0.92
ATXN3-201ENST00000340660 C7orf72A4D263 438 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 LGALS16A8MUM7 142 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 H2AFYO75367 372 aaKnown RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 GAS8O95995 478 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 CT45A8P0DMV1 189 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 CT45A9P0DMV2 189 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 MAGEB1P43366 347 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 CRADDP78560 199 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 UBXN1Q04323 297 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 EMX1Q04741 257 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 CSTF3Q12996 717 aaKnown RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 HIKESHIQ53FT3 197 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 CT45A2Q5DJT8 189 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 CPTPQ5TA50 214 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 DHRS7BQ6IAN0 325 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 DARS2Q6PI48 645 aaKnown RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 BBS12Q6ZW61 710 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 IKBIPQ70UQ0 350 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 SATL1Q86VE3 508 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 RHOT2Q8IXI1 618 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 KRT78Q8N1N4 520 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 ZNF527Q8NB42 609 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 SRFBP1Q8NEF9 429 aaKnown RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 OR4N2Q8NGD1 307 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 OR52R1Q8NGF1 315 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 TBC1D15Q8TC07 691 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 ST7LQ8TDW4 575 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 ALG3Q92685 438 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 APH1AQ96BI3 265 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 TSPAN17Q96FV3 270 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 RCC1LQ96I51 464 aaKnown RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 KLHDC3Q9BQ90 382 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 HEMGNQ9BXL5 484 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 TMEM165Q9HC07 324 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 UBAP1Q9NZ09 502 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 TRMT6Q9UJA5 497 aaKnown RBP9.29□□□□□ -0.92
ATXN3-201ENST00000340660 HYOU1Q9Y4L1 999 aa9.29□□□□□ -0.92
ATXN3-201ENST00000340660 A0A087X0T9 212 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 OR6C65A6NJZ3 312 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 VSTM5A8MXK1 200 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 PGRMC2O15173 223 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 EFNA2O43921 213 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 CYTIPO60759 359 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 PRAMEF4O60810 478 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 VAPBO95292 243 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 CELA3BP08861 270 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 CCDC159P0C7I6 412 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 FAM228BP0C875 321 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 NR2F6P10588 404 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 ETV4P43268 484 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 AP1S2P56377 157 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 EIF3EP60228 445 aaKnown RBP9.28□□□□□ -0.92
ATXN3-201ENST00000340660 PRICKLE4Q2TBC4 344 aa9.28□□□□□ -0.92
ATXN3-201ENST00000340660 PLPPR5Q32ZL2 321 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms