RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 BCHEP06276 602 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 CCR7P32248 378 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 MLLT1Q03111 559 aaPredicted RBP14.24□□□□□ -0.13
LIMK2-203ENST00000340552 FNDC3BQ53EP0 1204 aaKnown RBP14.24□□□□□ -0.13
LIMK2-203ENST00000340552 CCDC157Q569K6 752 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 FAM69AQ5T7M9 428 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 OR6V1Q8N148 313 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 TMEM185AQ8NFB2 350 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 OR6K3Q8NGY3 331 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 RXFP4Q8TDU9 374 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 NOX3Q9HBY0 568 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 A4GNTQ9UNA3 340 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DOCK8Q8NF50 2099 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 A0A1B0GW55 424 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 TMEM82A0PJX8 343 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 MEX3AA1L020 520 aaKnown RBP14.24□□□□□ -0.13
LIMK2-203ENST00000340552 HYAL3O43820 417 aaPredicted RBP14.24□□□□□ -0.13
LIMK2-203ENST00000340552 MTX2O75431 263 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 IGHA1P01876 353 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DUX4L2P0CJ85 424 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DUX4L3P0CJ86 424 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DUX4L4P0CJ87 422 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DUX4L5P0CJ88 424 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DUX4L6P0CJ89 424 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DUX4L7P0CJ90 424 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 CD96P40200 585 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 PRR5P85299 388 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 PRSS53Q2L4Q9 553 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 TANGO2Q6ICL3 276 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 USP53Q70EK8 1073 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DPPA4Q7L190 304 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 PARS2Q7L3T8 475 aaKnown RBP14.24□□□□□ -0.13
LIMK2-203ENST00000340552 SLC9B2Q86UD5 537 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 SVBPQ8N300 66 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 GANCQ8TET4 914 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 SKA2Q8WVK7 121 aaPredicted RBP14.24□□□□□ -0.13
LIMK2-203ENST00000340552 PAPOLGQ9BWT3 736 aaKnown RBP14.24□□□□□ -0.13
LIMK2-203ENST00000340552 ENKD1Q9H0I2 346 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 PRM3Q9NNZ6 103 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 DUX4Q9UBX2 424 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 ACAD8Q9UKU7 415 aa14.24□□□□□ -0.13
LIMK2-203ENST00000340552 PLXNA2O75051 1894 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 PGRMC2O15173 223 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 CH25HO95992 272 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 ACP5P13686 325 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 ATP1B2P14415 290 aaPredicted RBP14.23□□□□□ -0.13
LIMK2-203ENST00000340552 ACHEP22303 614 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 FCARP24071 287 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 AKR1C2P52895 323 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 DCDP81605 110 aaKnown RBP14.23□□□□□ -0.13
LIMK2-203ENST00000340552 AKR1C1Q04828 323 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 CLEC12AQ5QGZ9 265 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 COMTD1Q86VU5 262 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 SLC44A3Q8N4M1 653 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 BBS1Q8NFJ9 593 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 PHOSPHO1Q8TCT1 267 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 SLC38A5Q8WUX1 472 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 CDCA3Q99618 268 aaPredicted RBP14.23□□□□□ -0.13
LIMK2-203ENST00000340552 SMAD5Q99717 465 aaKnown RBP14.23□□□□□ -0.13
LIMK2-203ENST00000340552 GINS4Q9BRT9 223 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 RIOK2Q9BVS4 552 aaKnown RBP14.23□□□□□ -0.13
LIMK2-203ENST00000340552 OBP2AQ9NY56 170 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 AKAP7Q9P0M2 348 aaPredicted RBP14.23□□□□□ -0.13
LIMK2-203ENST00000340552 PCDHGA5Q9Y5G8 931 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 PLXND1Q9Y4D7 1925 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 PIP5K1CO60331 668 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 S100A8P05109 93 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 METAP1P53582 386 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 PFN3P60673 137 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 UBE2IP63279 158 aaKnown RBP14.23□□□□□ -0.13
LIMK2-203ENST00000340552 FAAP20Q6NZ36 180 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 APOOLQ6UXV4 268 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 MOB3CQ70IA8 216 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 SFTPA1Q8IWL2 248 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 ELP5Q8TE02 316 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 ZNF285Q96NJ3 590 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 REEP4Q9H6H4 257 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 TRPV4Q9HBA0 871 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 DCAF16Q9NXF7 216 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 TAS2R5Q9NYW4 299 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 KLHL42Q9P2K6 505 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 MSRAQ9UJ68 235 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 CAMK2AQ9UQM7 478 aa14.23□□□□□ -0.13
LIMK2-203ENST00000340552 UBXN7O94888 489 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 PRNPP04156 253 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 GP1BAP07359 652 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 ELFN1P0C7U0 828 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 ZNF35P13682 527 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 ATF1P18846 271 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 CNR1P21554 472 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 S100PP25815 95 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 RNF144AP50876 292 aaPredicted RBP14.22□□□□□ -0.13
LIMK2-203ENST00000340552 NR0B1P51843 470 aaKnown RBP14.22□□□□□ -0.13
LIMK2-203ENST00000340552 PDGFRLQ15198 375 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 SGCAQ16586 387 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 HNRNPA1L2Q32P51 320 aaKnown RBP14.22□□□□□ -0.13
LIMK2-203ENST00000340552 HENMT1Q5T8I9 393 aaKnown RBP14.22□□□□□ -0.13
LIMK2-203ENST00000340552 HES5Q5TA89 166 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 TRAM1L1Q8N609 369 aa14.22□□□□□ -0.13
LIMK2-203ENST00000340552 MAN2C1Q9NTJ4 1040 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms