RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 CPNE3O75131 537 aaKnown RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 CSO75390 466 aaKnown RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SULT1C4O75897 302 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 CFL1P23528 166 aaKnown RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 OR1E2P47887 323 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 BTG2P78543 158 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 H3F3AP84243 136 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 GANABQ14697 944 aaKnown RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 EXT1Q16394 746 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 KRT80Q6KB66 452 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 JMJD6Q6NYC1 403 aaPredicted RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 NPEPL1Q8NDH3 523 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 OR5W2Q8NH69 310 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SGCDQ92629 289 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 KAT2AQ92830 837 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 UBQLN3Q9H347 655 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ADGRL4Q9HBW9 690 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 KLHL28Q9NXS3 571 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ST6GALNAC2Q9UJ37 374 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF337Q9Y3M9 751 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF292O60281 2723 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 TRDV1A0A1B0GX56 115 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 OPN1SWP03999 348 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 HRGP04196 525 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 TNFRSF1BP20333 461 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 NT5EP21589 574 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 CTSSP25774 331 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SOAT1P35610 550 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 RGS6P49758 472 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 P2RX1P51575 399 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PRPS1P60891 318 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ROM1Q03395 351 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 GALEQ14376 348 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF529Q6P280 563 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ARHGAP11AQ6P4F7 1023 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 KIRREL2Q6UWL6 708 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SMYD1Q8NB12 490 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 IFI44Q8TCB0 444 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PAQR8Q8TEZ7 354 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 TMEM255BQ8WV15 326 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 DTNBP1Q96EV8 351 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SENP5Q96HI0 755 aaPredicted RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 MCHR1Q99705 422 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SOX17Q9H6I2 414 aaPredicted RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 TBCCD1Q9NVR7 557 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SCN3BQ9NY72 215 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 CHCHD2Q9Y6H1 151 aaPredicted RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PTPRQQ9UMZ3 2332 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 NUMA1Q14980 2115 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 C21orf140B9A014 251 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 TMEM150CB9EJG8 249 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF670-ZNF695F2Z2N8 137 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 HCN1O60741 890 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 OR2B3O76000 313 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 RCBTB2O95199 551 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 UTS2O95399 124 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 HPP00738 406 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 IL1AP01583 271 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PEPDP12955 493 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PRG2P13727 222 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 CD40LGP29965 261 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 GABRA5P31644 462 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 GRK6P43250 576 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 RNF4P78317 190 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 DCDP81605 110 aaKnown RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PIN1Q13526 163 aaPredicted RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 DMKNQ6E0U4 476 aaPredicted RBP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 CCDC190Q86UF4 302 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PSD4Q8NDX1 1056 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 TPD52L3Q96J77 140 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 PGLYRP3Q96LB9 341 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 NUDT22Q9BRQ3 303 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 FNDC11Q9BVV2 318 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 TMCC3Q9ULS5 477 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 SLC7A7Q9UM01 511 aa4.89□□□□□ -1.63
PRPF4B-201ENST00000337659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 A0A1W2PNU3 283 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ENTPD6O75354 484 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 TIAF1O95411 115 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 DCNP07585 359 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 LIPAP38571 399 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MLLT10P55197 1068 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CASP9P55211 416 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CRMP1Q14194 572 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 TOMM20Q15388 145 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNHIT3Q15649 155 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CD226Q15762 336 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 NRN1LQ496H8 165 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 SLC30A6Q6NXT4 461 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MEPCEQ7L2J0 689 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 C16orf62Q7Z3J2 963 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 TMEFF1Q8IYR6 380 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 OR6Q1Q8NGQ2 317 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CNOT9Q92600 299 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 PTP4A1Q93096 173 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 RTN4RQ9BZR6 473 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 FGF21Q9NSA1 209 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CLN6Q9NWW5 311 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZMIZ1Q9ULJ6 1067 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms