RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 EDARQ9UNE0 448 aa10.14□□□□□ -0.79
MRPL55-203ENST00000336520 TESMINQ9Y4I5 508 aa10.14□□□□□ -0.79
MRPL55-203ENST00000336520 PCDHB14Q9Y5E9 798 aa10.14□□□□□ -0.79
MRPL55-203ENST00000336520 ABCA4P78363 2273 aa10.14□□□□□ -0.79
MRPL55-203ENST00000336520 IGHV3-15A0A0B4J1V0 119 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 FAM221AA4D161 298 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CFAP73A6NFT4 308 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 C5orf58C9J3I9 102 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 SULT2B1O00204 365 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CLIC1O00299 241 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 AP3D1O14617 1153 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 PRKD3O94806 890 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 GOSR1O95249 250 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 NCF2P19878 526 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CCNA2P20248 432 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 RPS4Y1P22090 263 aaKnown RBP10.13□□□□□ -0.79
MRPL55-203ENST00000336520 ENPP1P22413 925 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 DNAJA1P31689 397 aaKnown RBP10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CCKARP32238 428 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 ATP4BP51164 291 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 RAC3P60763 192 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CSNK2A1P68400 391 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-203ENST00000336520 IRX1P78414 480 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-203ENST00000336520 LIN52Q52LA3 116 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 SYT14P1Q58G82 188 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 RPS26P11Q5JNZ5 115 aaPredicted RBP10.13□□□□□ -0.79
MRPL55-203ENST00000336520 FUNDC1Q8IVP5 155 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 SLC43A2Q8N370 569 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 OR52P1PQ8NH57 321 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 SLC38A5Q8WUX1 472 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 WFIKKN1Q96NZ8 548 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CCDC106Q9BWC9 280 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 RABEP2Q9H5N1 569 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 NPHS2Q9NP85 383 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CTPS2Q9NRF8 586 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 TMEM45AQ9NWC5 275 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 ZNF226Q9NYT6 803 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 KLHL9Q9P2J3 617 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 KLHL13Q9P2N7 655 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 CHRNA9Q9UGM1 479 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 TRIM33Q9UPN9 1127 aa10.13□□□□□ -0.79
MRPL55-203ENST00000336520 DSPPQ9NZW4 1301 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 A0A0G2JND7 137 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 EDF1O60869 148 aaKnown RBP10.12□□□□□ -0.79
MRPL55-203ENST00000336520 FESP07332 822 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 TFPTP0C1Z6 253 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 PPIBP23284 216 aaKnown RBP10.12□□□□□ -0.79
MRPL55-203ENST00000336520 HTR3AP46098 478 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 DIO1P49895 249 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 PLAURQ03405 335 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 FADDQ13158 208 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 LARS2Q15031 903 aaKnown RBP10.12□□□□□ -0.79
MRPL55-203ENST00000336520 RGNQ15493 299 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 MAPK11Q15759 364 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ANKRD34AQ69YU3 496 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ZNF836Q6ZNA1 936 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 BEND4Q6ZU67 534 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ZNF550Q7Z398 422 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 VRK2Q86Y07 508 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 TUSC5Q8IXB3 177 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ZNF440Q8IYI8 595 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ZHX1-C8orf76Q96EF9 292 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ZC3HAV1LQ96H79 300 aaKnown RBP10.12□□□□□ -0.79
MRPL55-203ENST00000336520 TMEM19Q96HH6 336 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 TACO1Q9BSH4 297 aaKnown RBP10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ARMC7Q9H6L4 198 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 GP6Q9HCN6 339 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 RLIMQ9NVW2 624 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ST6GALNAC2Q9UJ37 374 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ZNF232Q9UNY5 417 aa10.12□□□□□ -0.79
MRPL55-203ENST00000336520 ZNF443Q9Y2A4 671 aaPredicted RBP10.12□□□□□ -0.79
MRPL55-203ENST00000336520 TEP1Q99973 2627 aaKnown RBP10.11□□□□□ -0.79
MRPL55-203ENST00000336520 CSMD1Q96PZ7 3565 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 TMED7-TICAM2A0A0A6YYA0 188 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 A0A0G2JPF8 293 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 CDHR4A6H8M9 788 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 HNRNPCL2B2RXH8 293 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 HNRNPCL3B7ZW38 293 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 SMAD9O15198 467 aaKnown RBP10.11□□□□□ -0.79
MRPL55-203ENST00000336520 HNRNPCL1O60812 293 aaKnown RBP10.11□□□□□ -0.79
MRPL55-203ENST00000336520 ADAM11O75078 769 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 HRGP04196 525 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 YES1P07947 543 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 THBS1P07996 1170 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 NUDT7P0C024 238 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 GKN3PP0CG01 181 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 HNRNPCL4P0DMR1 293 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 DNASE1P24855 282 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 FKBP2P26885 142 aaKnown RBP10.11□□□□□ -0.79
MRPL55-203ENST00000336520 TACR3P29371 465 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 SLC1A3P43003 542 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 POLR2HP52434 150 aaKnown RBP10.11□□□□□ -0.79
MRPL55-203ENST00000336520 ART1P52961 327 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 COPZ1P61923 177 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 RASGEF1BQ0VAM2 473 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 EPS8Q12929 822 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 ZSWIM7Q19AV6 140 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 PAGE3Q5JUK9 113 aa10.11□□□□□ -0.79
MRPL55-203ENST00000336520 LRIF1Q5T3J3 769 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms