RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RPS19P39019 145 aaKnown RBP10.96□□□□□ -0.65
HDAC6-201ENST00000334136 PPP1CAP62136 330 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 KDM4DQ6B0I6 523 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 PLBD1Q6P4A8 553 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 ZNF595Q8IYB9 648 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 LINC00471Q8N535 108 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 ZC3H10Q96K80 434 aaKnown RBP10.96□□□□□ -0.65
HDAC6-201ENST00000334136 SPNS1Q9H2V7 528 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 FBXL3Q9UKT7 428 aa10.96□□□□□ -0.65
HDAC6-201ENST00000334136 SPAARA0A1B0GVQ0 90 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 LNP1A1A4G5 178 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 SLC19A2O60779 497 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 GPR37L1O60883 481 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 AIFM1O95831 613 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 GABRA3P34903 492 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 FOXC1Q12948 553 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 FZD5Q13467 585 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 CDK10Q15131 360 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 YOD1Q5VVQ6 348 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-201ENST00000334136 KIF18BQ86Y91 864 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 FAM109AQ8N4B1 249 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 OR2T33Q8NG76 320 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 OR5D16Q8NGK9 328 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 OR5L2Q8NGL0 311 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 OR5J2Q8NH18 312 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 SLC6A16Q9GZN6 736 aa10.96□□□□□ -0.66
HDAC6-201ENST00000334136 ELOA3DA6NLF2 546 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 OR2AT4A6NND4 320 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 C17orf105B2RV13 164 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SNTA1Q13424 505 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ELOA3BQ3SY89 546 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 RPTNQ6XPR3 784 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 LRRC69Q6ZNQ3 347 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF627Q7L945 461 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ELOA3Q8NG57 546 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 OR52P1PQ8NH57 321 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 MKKSQ9NPJ1 570 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 FBXO8Q9NRD0 319 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 HPF1Q9NWY4 346 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TEX10Q9NXF1 929 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TEX46H3BTG2 121 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 GFRA3O60609 400 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SLC25A12O75746 678 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 RCBTB2O95199 551 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 AHCYP23526 432 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 VAMP1P23763 118 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 RORAP35398 523 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TSFMP43897 325 aaKnown RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SLC14A1Q13336 389 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 CYB561A3Q8NBI2 242 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 OR4D9Q8NGE8 314 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TESCQ96BS2 214 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 GON7Q9BXV9 100 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 PCDHGA6Q9Y5G7 932 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ALG5Q9Y673 324 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 CDH10Q9Y6N8 788 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 CKAP5Q14008 2032 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ACACAQ13085 2346 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TRBV4-1A0A0J9YWV2 114 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 A6NCN8 305 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TRIM3O75382 744 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TGM4P49221 684 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TAF13Q15543 124 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 C18orf63Q68DL7 685 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 CPOQ8IVL8 374 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 RIMKLAQ8IXN7 391 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 DNAJA3Q96EY1 480 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SCARF2Q96GP6 870 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ZNF354BQ96LW1 612 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 NXT1Q9UKK6 140 aaKnown RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SH2B3Q9UQQ2 575 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ATG4BQ9Y4P1 393 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 KLK4Q9Y5K2 254 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 NUP210Q8TEM1 1887 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 C5orf51A6NDU8 294 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SPNP16150 400 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 CBLP22681 906 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ADH7P40394 386 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 POU6F2P78424 691 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TNFRSF17Q02223 184 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 PON3Q15166 354 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 HES3Q5TGS1 186 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 FBXO42Q6P3S6 717 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 LACC1Q8IV20 430 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SYT14Q8NB59 555 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ZBTB44Q8NCP5 570 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 OR5T3Q8NGG3 340 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 ELMOD3Q96FG2 381 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 S100A13Q99584 98 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 THSD1Q9NS62 852 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 VNN3Q9NY84 501 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 TAS2R3Q9NYW6 316 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 CKLFQ9UBR5 152 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 KCND3Q9UK17 655 aa10.95□□□□□ -0.66
HDAC6-201ENST00000334136 SLC22A7Q9Y694 548 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms