RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FAM74A1Q5RGS3 127 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 BATF2Q8N1L9 274 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 OR11L1Q8NGX0 322 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 SHARPINQ9H0F6 387 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 TRAV27A0A087WT01 109 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 WNT7AO00755 349 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 HCRTO43612 131 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 CCL5P13501 91 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 EDDM3AQ14507 147 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 SF3B4Q15427 424 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTCH1-201ENST00000331920 MS4A15Q8N5U1 240 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 TMEM19Q96HH6 336 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 SLIT1O75093 1534 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 AADACP22760 399 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 AGFG1P52594 562 aaKnown RBP15.42■□□□□ 0.06
PTCH1-201ENST00000331920 PBX4Q9BYU1 374 aa15.42■□□□□ 0.06
PTCH1-201ENST00000331920 CPT2P23786 658 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 PTGER1P34995 402 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 NR0B2Q15466 257 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 OR52E8Q6IFG1 317 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF574Q6ZN55 896 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 MVB12BQ9H7P6 319 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 FETUBQ9UGM5 382 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 INSL5Q9Y5Q6 135 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 OR10K2Q6IF99 312 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF813Q6ZN06 617 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 ELP4Q96EB1 424 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 SUSD3Q96L08 255 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 EGLN3Q9H6Z9 239 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 MINDY3Q9H8M7 445 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 HTR5AP47898 357 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 RAB13P51153 203 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 ELLP55199 621 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 FAM189BP81408 668 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 GRAMD2AQ8IUY3 354 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 PLK3Q9H4B4 646 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 NIPAL2Q9H841 368 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 TRAPPC13A5PLN9 417 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 HNRNPA2B1P22626 353 aaKnown RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 SLC1A3P43003 542 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 C18orf21Q32NC0 220 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 CPOQ8IVL8 374 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 MARCH4Q9P2E8 410 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 MTHFD2P13995 350 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 TXNRD3NBQ6F5E7 133 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 LSMEM2Q8N112 164 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 FAM109AQ8N4B1 249 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 OR13J1Q8NGT2 312 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF582Q96NG8 517 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 TEX264Q9Y6I9 313 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 MEGF11A6BM72 1044 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 ADAM12O43184 909 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 F10P00742 488 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 OR13C7P0DN81 318 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 FCGR2AP12318 317 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 SPATS1Q496A3 300 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 MTHFD2LQ9H903 347 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 FAM212BQ9NTI7 297 aaPredicted RBP15.41■□□□□ 0.06
PTCH1-201ENST00000331920 C1orf123Q9NWV4 160 aa15.41■□□□□ 0.06
PTCH1-201ENST00000331920 GM2AP17900 193 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 CA5AP35218 305 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 LTBQ06643 244 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 MSS51Q4VC12 460 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 RABEPKQ7Z6M1 372 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 GDPD1Q8N9F7 314 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF382Q96SR6 550 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 ATF6BQ99941 703 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 FBXL2Q9UKC9 423 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 A6NIZ1 184 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 HEXAP06865 529 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 RAP1BP61224 184 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 RAP1AP62834 184 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 SEC22AQ96IW7 307 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 KCNJ15Q99712 375 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 PARP12Q9H0J9 701 aaKnown RBP15.4■□□□□ 0.06
PTCH1-201ENST00000331920 SAGE1Q9NXZ1 904 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 UPK1BO75841 260 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 GSRP00390 522 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 PTHP01270 115 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 OR5I1Q13606 314 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 FIGLAQ6QHK4 219 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 ZFAND4Q86XD8 727 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 OR1S2Q8NGQ3 325 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 ALOXE3Q9BYJ1 711 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 SMOC2Q9H3U7 446 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 PSMB3P49720 205 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 UBE2IP63279 158 aaKnown RBP15.4■□□□□ 0.06
PTCH1-201ENST00000331920 MFGE8Q08431 387 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF331Q9NQX6 463 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-201ENST00000331920 CCM2LQ9NUG4 571 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-201ENST00000331920 ADAMTS6Q9UKP5 1117 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 GAPDHSO14556 408 aaPredicted RBP15.4■□□□□ 0.06
PTCH1-201ENST00000331920 SULT1C4O75897 302 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 VNN1O95497 513 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 CRMP1Q14194 572 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 OR5B3Q8NH48 314 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 FRS3O43559 492 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 SMIM17P0DL12 118 aa15.4■□□□□ 0.06
PTCH1-201ENST00000331920 HNRNPH3P31942 346 aaKnown RBP15.4■□□□□ 0.06
PTCH1-201ENST00000331920 KCNJ8Q15842 424 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms