RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 CXorf56Q9H5V9 222 aa16.09■□□□□ 0.17
RAB28-202ENST00000330852 VPS13CQ709C8 3753 aa16.09■□□□□ 0.17
RAB28-202ENST00000330852 DNPH1O43598 174 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 MAGEA8P43361 318 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 HPCAP84074 193 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 BST1Q10588 318 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 MERTKQ12866 999 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 PDK3Q15120 406 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 SYT14P1Q58G82 188 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 HHATQ5VTY9 493 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 TNFAIP8L2Q6P589 184 aaPredicted RBP16.08■□□□□ 0.17
RAB28-202ENST00000330852 YTHDF3Q7Z739 585 aaKnown RBP16.08■□□□□ 0.17
RAB28-202ENST00000330852 CMIPQ8IY22 773 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 RAB8BQ92930 207 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 COX4I2Q96KJ9 171 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 SLC35A5Q9BS91 424 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 ESRP2Q9H6T0 727 aaKnown RBP16.08■□□□□ 0.17
RAB28-202ENST00000330852 ZNF701Q9NV72 531 aaPredicted RBP16.08■□□□□ 0.17
RAB28-202ENST00000330852 PNPOQ9NVS9 261 aa16.08■□□□□ 0.17
RAB28-202ENST00000330852 USF3Q68DE3 2245 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 TRPC5OSA6NMA1 111 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 ERLIN1O75477 346 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 H6PDO95479 791 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 ADAP00813 363 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 DIO1P49895 249 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 KCNJ10P78508 379 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 MAPK14Q16539 360 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 FRRS1Q6ZNA5 592 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 GRINAQ7Z429 371 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 ZHX1-C8orf76Q96EF9 292 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 PERPQ96FX8 193 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 TRNT1Q96Q11 434 aaKnown RBP16.08■□□□□ 0.16
RAB28-202ENST00000330852 POTEKPQ9BYX7 375 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 QRSL1Q9H0R6 528 aaKnown RBP16.08■□□□□ 0.16
RAB28-202ENST00000330852 AIG1Q9NVV5 245 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 THAP1Q9NVV9 213 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 ING1Q9UK53 422 aaPredicted RBP16.08■□□□□ 0.16
RAB28-202ENST00000330852 HDGFL3Q9Y3E1 203 aa16.08■□□□□ 0.16
RAB28-202ENST00000330852 CENPVL1A0A0U1RR11 272 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 SLCO1B7G3V0H7 640 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 SULT2B1O00204 365 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 SMAD9O15198 467 aaKnown RBP16.07■□□□□ 0.16
RAB28-202ENST00000330852 HDAC3O15379 428 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 HTR3AP46098 478 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 PTH2RP49190 550 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 SLC18A1P54219 525 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 LTBQ06643 244 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 GPAT3Q53EU6 434 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 CLEC9AQ6UXN8 241 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 GALNT5Q7Z7M9 940 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 MTDHQ86UE4 582 aaKnown RBP16.07■□□□□ 0.16
RAB28-202ENST00000330852 GLB1L3Q8NCI6 653 aaPredicted RBP16.07■□□□□ 0.16
RAB28-202ENST00000330852 ZNF563Q8TA94 476 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 RAB3IL1Q8TBN0 382 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 Q96MF0 132 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 PANX1Q96RD7 426 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 PAIP2Q9BPZ3 127 aaKnown RBP16.07■□□□□ 0.16
RAB28-202ENST00000330852 CCDC106Q9BWC9 280 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 EMC3Q9P0I2 261 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 CHRNA9Q9UGM1 479 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 RNF115Q9Y4L5 304 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 CADP27708 2225 aa16.07■□□□□ 0.16
RAB28-202ENST00000330852 IGKV3D-15A0A087WSY6 115 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 IGHV3-15A0A0B4J1V0 119 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 ZNF814B7Z6K7 855 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 SDHDO14521 159 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 PMS2P2O95744 297 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 PGRP06401 933 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 HEXAP06865 529 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 MAP2K6P52564 334 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 CASP9P55211 416 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 FUT5Q11128 374 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 TAB1Q15750 504 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 NCMAPQ5T1S8 102 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 BHLHA15Q7RTS1 189 aaPredicted RBP16.06■□□□□ 0.16
RAB28-202ENST00000330852 HDXQ7Z353 690 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 P2RY8Q86VZ1 359 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 ARFGAP2Q8N6H7 521 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 OR52E6Q96RD3 313 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 ZBTB18Q99592 522 aa16.06■□□□□ 0.16
RAB28-202ENST00000330852 NSD1Q96L73 2696 aaPredicted RBP16.05■□□□□ 0.16
RAB28-202ENST00000330852 HMGN4O00479 90 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 PLAUP00749 431 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 FESP07332 822 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 CD3EP07766 207 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 ALDOCP09972 364 aaKnown RBP16.05■□□□□ 0.16
RAB28-202ENST00000330852 UFM1P61960 85 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 GNA13Q14344 377 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
RAB28-202ENST00000330852 LRRC74BQ6ZQY2 392 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 PIWIL2Q8TC59 973 aaKnown RBP16.05■□□□□ 0.16
RAB28-202ENST00000330852 AKAP1Q92667 903 aaKnown RBP eCLIP16.05■□□□□ 0.16
RAB28-202ENST00000330852 ZNF75CPQ92670 426 aaPredicted RBP16.05■□□□□ 0.16
RAB28-202ENST00000330852 MTHFD2LQ9H903 347 aaPredicted RBP16.05■□□□□ 0.16
RAB28-202ENST00000330852 TRAPPC4Q9Y296 219 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 GPR45Q9Y5Y3 372 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 GPR171O14626 319 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 TFPIP10646 304 aa16.05■□□□□ 0.16
RAB28-202ENST00000330852 CHRNEQ04844 493 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms