RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 E9PBE3 544 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 STX11O75558 287 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 TNFSF13O75888 250 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 NTN1O95631 604 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 C6orf47O95873 294 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 CGAP01215 116 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 FREM3P0C091 2139 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 LINGO3P0C6S8 592 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 PABPC4LP0CB38 370 aaKnown RBP5.68□□□□□ -1.5
SMG1-201ENST00000330588 HOXC12P31275 282 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 PRKAG1P54619 331 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 WNT3P56703 355 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 BST1Q10588 318 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 GSTA3Q16772 222 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 SPDYE7PQ495Y7 208 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 BEND6Q5SZJ8 279 aaPredicted RBP5.68□□□□□ -1.5
SMG1-201ENST00000330588 AGBL2Q5U5Z8 902 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 SAXO2Q658L1 398 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 GGNQ86UU5 652 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 CCDC103Q8IW40 242 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 CMIPQ8IY22 773 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 TRIML2Q8N7C3 387 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 B4GALNT2Q8NHY0 566 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 AGR3Q8TD06 166 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 CDS1Q92903 461 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 ARL8AQ96BM9 186 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 MBD6Q96DN6 1003 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 NEURL3Q96EH8 262 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 GMPPAQ96IJ6 420 aaPredicted RBP5.68□□□□□ -1.5
SMG1-201ENST00000330588 MRGPRX4Q96LA9 322 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 DOCK7Q96N67 2140 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 SDF2Q99470 211 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 CDADC1Q9BWV3 514 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 RBM24Q9BX46 236 aaKnown RBP5.68□□□□□ -1.5
SMG1-201ENST00000330588 ZNF350Q9GZX5 532 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 CXXC4Q9H2H0 198 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 TMBIM4Q9HC24 238 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 KCNK9Q9NPC2 374 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 FANCFQ9NPI8 374 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 MED17Q9NVC6 651 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 AIG1Q9NVV5 245 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 NKIRAS1Q9NYS0 192 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 FLRT3Q9NZU0 649 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.68□□□□□ -1.5
SMG1-201ENST00000330588 TMEFF2Q9UIK5 374 aaPredicted RBP5.68□□□□□ -1.5
SMG1-201ENST00000330588 MCTS1Q9ULC4 181 aaKnown RBP5.68□□□□□ -1.5
SMG1-201ENST00000330588 ICAM5Q9UMF0 924 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 ZNF337Q9Y3M9 751 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 DTNAQ9Y4J8 743 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 V9GYY5 206 aaPredicted RBP5.68□□□□□ -1.5
SMG1-201ENST00000330588 CACNA1DQ01668 2161 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 KIAA1549Q9HCM3 1950 aa5.68□□□□□ -1.5
SMG1-201ENST00000330588 TUBAL3A6NHL2 446 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 KDM4EB2RXH2 506 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 EEF1E1-BLOC1S5C9J1V9 151 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 FAAHO00519 579 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SDHDO14521 159 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 CFLARO15519 480 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 EEF1E1O43324 174 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 KIAA0513O60268 411 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SS18L1O75177 396 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 NME6O75414 186 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 TGDSO95455 350 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ZCCHC18P0CG32 403 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 IDO1P14902 403 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 PPP3CBP16298 524 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 BGNP21810 368 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ME2P23368 584 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 UQCRC1P31930 480 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ECI1P42126 302 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 KIR2DL2P43627 348 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 STARP49675 285 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 KHKP50053 298 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 MAP2K6P52564 334 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 CLDN15P56746 228 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ZNF117Q03924 483 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SELENBP1Q13228 472 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 CTU2Q2VPK5 515 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 PDCD4Q53EL6 469 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 ATAD3BQ5T9A4 648 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR5M10Q6IEU7 315 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR4F3Q6IEY1 312 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SSX8Q7RTT4 187 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SZRD1Q7Z422 152 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 P4HA3Q7Z4N8 544 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 C6orf120Q7Z4R8 191 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 KRTCAP2Q8N6L1 136 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 FAM71CQ8NEG0 241 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR6K3Q8NGY3 331 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ST8SIA1Q92185 356 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 JADE3Q92613 823 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 CPNE4Q96A23 557 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 STARD4Q96DR4 205 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 C16orf58Q96GQ5 468 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SLC35G5Q96KT7 338 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR7D2Q96RA2 312 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 FOXC2Q99958 501 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SLC39A3Q9BRY0 314 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 LAT2Q9GZY6 243 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 TIGARQ9NQ88 270 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms