RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ZNF468Q5VIY5 522 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 TMEM236Q5W0B7 351 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF613Q6PF04 617 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 OPN5Q6U736 354 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 CCDC103Q8IW40 242 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 RNF113BQ8IZP6 322 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 OR10G3Q8NGC4 313 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 ASB15Q8WXK1 588 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 HOXD1Q9GZZ0 328 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 COMMD3-BMI1R4GMX3 469 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 RGS10O43665 173 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 SOX14O95416 240 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 GKN3PP0CG01 181 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 PCMT1P22061 227 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 LSM11P83369 360 aaKnown RBP eCLIP17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 NTRK2Q16620 822 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 IL20RBQ6UXL0 311 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 RASSF6Q6ZTQ3 369 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 PTCHD4Q6ZW05 846 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 PRSS48Q7RTY5 328 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 BEST3Q8N1M1 668 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 SVOPQ8N4V2 548 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 OR13F1Q8NGS4 319 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF420Q8TAQ5 688 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 MYCBPQ99417 103 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 TSC22D3Q99576 134 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 GPA33Q99795 319 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 PRSS27Q9BQR3 290 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 DNAJB12Q9NXW2 375 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 ERVK-18Q9QC07 812 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 PSORS1C1Q9UIG5 152 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 RAXQ9Y2V3 346 aa17.13■□□□□ 0.33
EXOSC3-201ENST00000327304 C1QTNF9BB2RNN3 333 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 FADS1O60427 444 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 SEC14L2O76054 403 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 C1QTNF9P0C862 333 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 FPR3P25089 353 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 GSTT1P30711 240 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 SOX8P57073 446 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 SNRPGP62308 76 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 MVKQ03426 396 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 GTF2IRD2BQ6EKJ0 949 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CASP12Q6UXS9 341 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CCDC81Q6ZN84 652 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF550Q7Z398 422 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 NUP54Q7Z3B4 507 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 GTF2IRD2Q86UP8 949 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 TMEM156Q8N614 296 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 GATSQ8NAP1 163 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 POGLUT1Q8NBL1 392 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CNOT9Q92600 299 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 SIGLEC11Q96RL6 698 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 RTN4RQ9BZR6 473 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CCDC90BQ9GZT6 254 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 TMEM27Q9HBJ8 222 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 FKBP14Q9NWM8 211 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 URB1O60287 2271 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CHD8Q9HCK8 2581 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CFAP47Q6ZTR5 3102 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 SERINC4A6NH21 518 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CLCA1A8K7I4 914 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 SCDO00767 359 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 KLF4O43474 513 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 LYPD3O95274 346 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 NGFRP08138 427 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 HPGDP15428 266 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 EVI2BP34910 448 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 GIPRP48546 466 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CDK5Q00535 292 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 TLE3Q04726 772 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 PIGFQ07326 219 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CD226Q15762 336 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 NDUFAF6Q330K2 333 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 FNDC7Q5VTL7 733 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF527Q8NB42 609 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 GRHL3Q8TE85 626 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 TMEM255BQ8WV15 326 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 MUL1Q969V5 352 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 TRIM2Q9C040 744 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 SLC25A19Q9HC21 320 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 CLN6Q9NWW5 311 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 ANKRD10Q9NXR5 420 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 GPR83Q9NYM4 423 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 STMN3Q9NZ72 180 aa17.12■□□□□ 0.33
EXOSC3-201ENST00000327304 C17orf51A8MQB3 221 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 VGLL3A8MV65 326 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 ADAM10O14672 748 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 RRP8O43159 456 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 ADH7P40394 386 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 EMX1Q04741 257 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 TMEM201Q5SNT2 666 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 ABHD17BQ5VST6 288 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 BICRALQ6AI39 1079 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 MARCH3Q86UD3 253 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 CLVS1Q8IUQ0 354 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 LSMEM1Q8N8F7 131 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 OR8J1Q8NGP2 316 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 TTC9Q92623 222 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 MYDGFQ969H8 173 aa17.11■□□□□ 0.33
EXOSC3-201ENST00000327304 ARSGQ96EG1 525 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms