RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PPP1R14DQ9NXH3 145 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 COQ3Q9NZJ6 369 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 RNF212BA8MTL3 300 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 NUDT7P0C024 238 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 CD6P30203 668 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 HSD17B7P56937 341 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 GPR176Q14439 515 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 CLLU1OSQ5K130 101 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 FRMPD2BQ6IN97 320 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 ACSS1Q9NUB1 689 aaPredicted RBP19.69■□□□□ 0.74
RNF40-201ENST00000324685 MED17Q9NVC6 651 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 HIDE1A8MVS5 230 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 YY2O15391 372 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 DBHP09172 617 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 TAS2R30P59541 319 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 VRK2Q86Y07 508 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 LRRC56Q8IYG6 542 aaPredicted RBP19.69■□□□□ 0.74
RNF40-201ENST00000324685 PDLIM5Q96HC4 596 aaKnown RBP19.69■□□□□ 0.74
RNF40-201ENST00000324685 CREBZFQ9NS37 354 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 RNF186Q9NXI6 227 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 ADAM29Q9UKF5 820 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 A0A0D9SG52 128 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 CPMP14384 443 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 HLA-DMAP28067 261 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 RPS5P46782 204 aaKnown RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 VEGFCP49767 419 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 CLDN6P56747 220 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 HNRNPA1L2Q32P51 320 aaKnown RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 RFPL4BQ6ZWI9 263 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 BBS1Q8NFJ9 593 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 TMEM40Q8WWA1 233 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 TMEM269A0A1B0GVZ9 245 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 TOR1AO14656 332 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 GPRIN2O60269 458 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 HOXC13P31276 330 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 AHRP35869 848 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 WNT7BP56706 349 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 PIANPQ8IYJ0 282 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 SMIM3Q9BZL3 60 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 PRSS21Q9Y6M0 314 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 COL2A1P02458 1487 aaPredicted RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 MYADML2A6NDP7 307 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 ZNF780AO75290 641 aaPredicted RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 C1orf105O95561 183 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 HLA-AP01891 365 aaKnown RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 SERPINA2P20848 420 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 PRLHRP49683 370 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 MEX3DQ86XN8 651 aaKnown RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 RNF113BQ8IZP6 322 aaKnown RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 TTC9BQ8N6N2 239 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 SMAP2Q8WU79 429 aaPredicted RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 SLAMF9Q96A28 289 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 ZNF286AQ9HBT8 521 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 TUBG2Q9NRH3 451 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 TRAPPC2LH3BP13 241 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 SURF4O15260 269 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 PEX14O75381 377 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 S100A7P31151 101 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 EEF1A1P68104 462 aaKnown RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 TGFBR3Q03167 851 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 SQSTM1Q13501 440 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 SLC22A6Q4U2R8 563 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 HTR3DQ70Z44 454 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 ZNF765Q7L2R6 523 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 CD163Q86VB7 1156 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 KCTD12Q96CX2 325 aaKnown RBP19.68■□□□□ 0.74
RNF40-201ENST00000324685 MAP3K3Q99759 626 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 NKX2-4Q9H2Z4 354 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 UBQLN4Q9NRR5 601 aa19.68■□□□□ 0.74
RNF40-201ENST00000324685 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 CEBPZOSA8MTT3 80 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 TNFSF12O43508 249 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 HIST1H1TP22492 207 aaPredicted RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 MOB3CQ70IA8 216 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 ZNF296Q8WUU4 475 aaPredicted RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 METTL9Q9H1A3 318 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 ACAD8Q9UKU7 415 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 B4GAT1O43505 415 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 PRKACAP17612 351 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 PRKAR1BP31321 381 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 SPCS2Q15005 226 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 CNTNAP3Q9BZ76 1288 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 EHFQ9NZC4 300 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 SLC22A23A1A5C7 686 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 TSTD3H0UI37 97 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 CDK4P11802 303 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 SPOCK1Q08629 439 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 APOOLQ6UXV4 268 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 SLC38A1Q9H2H9 487 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 STARD5Q9NSY2 213 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 A0A087WUU8 490 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.67■□□□□ 0.74
RNF40-201ENST00000324685 PTHP01270 115 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 PRKACBP22694 351 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 CCR7P32248 378 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 TSPAN31Q12999 210 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 CTSL3PQ5NE16 218 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 CGB2Q6NT52 195 aa19.67■□□□□ 0.74
RNF40-201ENST00000324685 LIPIQ6XZB0 460 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms