RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CLDN22Q8N7P3 220 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 ZNF416Q9BWM5 594 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 OR52D1Q9H346 318 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 TMEM45AQ9NWC5 275 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 KLHL42Q9P2K6 505 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 TBC1D29Q9UFV1 150 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 FLVCR2Q9UPI3 526 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 METTL21EPA6NDL7 271 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 ANKRD61A6NGH8 418 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 OTOL1A6NHN0 477 aaPredicted RBP14.21□□□□□ -0.13
VARS2-201ENST00000321897 NDUFS1P28331 727 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 PBX2P40425 430 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 ZNF169Q14929 603 aaPredicted RBP14.21□□□□□ -0.13
VARS2-201ENST00000321897 COL28A1Q2UY09 1125 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 GPR155Q7Z3F1 870 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 PRICKLE2Q7Z3G6 844 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 TECPR1Q7Z6L1 1165 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 SAMD14Q8IZD0 417 aaPredicted RBP14.21□□□□□ -0.13
VARS2-201ENST00000321897 SEC61A2Q9H9S3 476 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 ACOXLQ9NUZ1 547 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 SDHAF2Q9NX18 166 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 APOBEC3BQ9UH17 382 aaKnown RBP14.21□□□□□ -0.13
VARS2-201ENST00000321897 GPR34Q9UPC5 381 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 CCL27Q9Y4X3 112 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 NUBP2Q9Y5Y2 271 aa14.21□□□□□ -0.13
VARS2-201ENST00000321897 A8MVJ9 347 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 TMEM150CB9EJG8 249 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 FZD7O75084 574 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 RFX2P48378 723 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 HCCSP53701 268 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ZBTB37Q5TC79 503 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 LAIR2Q6ISS4 152 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ZER1Q7Z7L7 766 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ZFP82Q8N141 532 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 LINC00471Q8N535 108 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 OR2L3Q8NG85 312 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 CHAC2Q8WUX2 184 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 NT5DC2Q9H857 520 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 IFT46Q9NQC8 304 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 PRTFDC1Q9NRG1 225 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 EXO1Q9UQ84 846 aaKnown RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 F8W036 122 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 H7C1C5 153 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 KRT33AO76009 404 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 MAS1P04201 325 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 THEGLP0DJG4 465 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 CBR1P16152 277 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 CD6P30203 668 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 SLC1A3P43003 542 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ARFIP1P53367 373 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 LCN6P62502 163 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 RAE1P78406 368 aaKnown RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 BLOC1S1P78537 153 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ZXDCQ2QGD7 858 aaPredicted RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 ACSM3Q53FZ2 586 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 FAAP20Q6NZ36 180 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 RPTNQ6XPR3 784 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 BEST3Q8N1M1 668 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 KLHDC7BQ96G42 594 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 PADI2Q9Y2J8 665 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 PCDHGB7Q9Y5F8 929 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 HRH3Q9Y5N1 445 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 IER3IP1Q9Y5U9 82 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 FOXE1O00358 373 aaPredicted RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 HMGN4O00479 90 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 TXNL1O43396 289 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 SGCEO43556 437 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 WISP3O95389 354 aaPredicted RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 DBIP07108 87 aaKnown RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 TRAPPC2P0DI81 140 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 TRAPPC2BP0DI82 140 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 CXCR1P25024 350 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 FABP5Q01469 135 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 MRPL2Q5T653 305 aaKnown RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 JAGN1Q8N5M9 183 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ZSCAN1Q8NBB4 408 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 RELL2Q8NC24 303 aaPredicted RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 C2CD4CQ8TF44 421 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ZNF582Q96NG8 517 aaPredicted RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 WASH6PQ9NQA3 447 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 C14orf105Q9NVL8 296 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 LIPT1Q9Y234 373 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 A0A087WUU8 490 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 PRSS38A1L453 326 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 SLC9B1P1A6NJY1 282 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 RBBP9O75884 186 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 PUS10Q3MIT2 529 aaKnown RBP14.2□□□□□ -0.14
VARS2-201ENST00000321897 TMEM88Q6PEY1 159 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 APOOLQ6UXV4 268 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 LRRC3BQ96PB8 259 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 FN3KQ9H479 309 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 ACTR10Q9NZ32 417 aa14.2□□□□□ -0.14
VARS2-201ENST00000321897 EEF1E1-BLOC1S5C9J1V9 151 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 PEX12O00623 359 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 SERPINA3P01011 423 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 SRSF5Q13243 272 aaKnown RBP14.19□□□□□ -0.14
VARS2-201ENST00000321897 TMEM44Q2T9K0 475 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 TMEM17Q86X19 198 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 UPRTQ96BW1 309 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms