RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 HS6ST2Q96MM7 605 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ALPK1Q96QP1 1244 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 PSD2Q9BQI7 771 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ARHGAP9Q9BRR9 750 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ZNF426Q9BUY5 554 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 OR2B2Q9GZK3 357 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ZNF703Q9H7S9 590 aaPredicted RBP12.34□□□□□ -0.43
PRPF18-201ENST00000320054 QPCTLQ9NXS2 382 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 OSGIN1Q9UJX0 560 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 TMCC3Q9ULS5 477 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 TP53TG5Q9Y2B4 290 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 KIAA1549Q9HCM3 1950 aa12.34□□□□□ -0.43
PRPF18-201ENST00000320054 ZZEF1O43149 2961 aa12.33□□□□□ -0.43
PRPF18-201ENST00000320054 TRBV4-1A0A0J9YWV2 114 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 SH3PXD2BA1X283 911 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 HTR3EA5X5Y0 456 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 ARRDC5A6NEK1 342 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 G3V2T6 193 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 K7EM74 188 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 ZIC3O60481 467 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 HPNP05981 417 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF17P17021 662 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 HK1P19367 917 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 FUT4P22083 530 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 APOBEC1P41238 236 aaKnown RBP12.33□□□□□ -0.44
PRPF18-201ENST00000320054 MAP2K6P52564 334 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 IST1P53990 364 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 MERTKQ12866 999 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 TRIP10Q15642 601 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 INAQ16352 499 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 MICAQ29983 383 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 FGD3Q5JSP0 725 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 DCST1Q5T197 706 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 PODNL1Q6PEZ8 512 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 ASB18Q6ZVZ8 466 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.33□□□□□ -0.44
PRPF18-201ENST00000320054 TMEM179BQ7Z7N9 219 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 SLC22A16Q86VW1 577 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 ZDHHC13Q8IUH4 622 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 NKAIN4Q8IVV8 208 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 RNF113BQ8IZP6 322 aaKnown RBP12.33□□□□□ -0.44
PRPF18-201ENST00000320054 GTPBP8Q8N3Z3 284 aaPredicted RBP12.33□□□□□ -0.44
PRPF18-201ENST00000320054 ICA1LQ8NDH6 482 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 OR52J3Q8NH60 311 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 C9orf43Q8TAL5 461 aaPredicted RBP12.33□□□□□ -0.44
PRPF18-201ENST00000320054 TMEM43Q9BTV4 400 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 OSBPL10Q9BXB5 764 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 TTTY12Q9BZ98 90 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 GABARAPL1Q9H0R8 117 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 DKKL1Q9UK85 242 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 OAZ3Q9UMX2 235 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 VDAC3Q9Y277 283 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 B3GNT3Q9Y2A9 372 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 U3KQV3 271 aa12.33□□□□□ -0.44
PRPF18-201ENST00000320054 A0A087WUU8 490 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 TMED7-TICAM2A0A0A6YYA0 188 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 ELOA3DA6NLF2 546 aaPredicted RBP12.32□□□□□ -0.44
PRPF18-201ENST00000320054 CCNB2O95067 398 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 RFPL3SP0C7P2 107 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 FAM87AP0C7U9 286 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF23P17027 643 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 CXCR1P25024 350 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 GDF1P27539 372 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 GCKP35557 465 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 PLGLB1Q02325 96 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 FOXF1Q12946 379 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 PPP1R8Q12972 351 aaKnown RBP12.32□□□□□ -0.44
PRPF18-201ENST00000320054 ELOA3BQ3SY89 546 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 OGFRL1Q5TC84 451 aaPredicted RBP12.32□□□□□ -0.44
PRPF18-201ENST00000320054 TTC33Q6PID6 262 aaPredicted RBP12.32□□□□□ -0.44
PRPF18-201ENST00000320054 WDR88Q6ZMY6 472 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 MBOAT2Q6ZWT7 520 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 ADGRG3Q86Y34 549 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 EPHX4Q8IUS5 362 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 TMEM251Q8N6I4 163 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 ELOA3Q8NG57 546 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 POC1BQ8TC44 478 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 GIPC3Q8TF64 312 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 TMEM239Q8WW34 195 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 SDCCAG3Q96C92 435 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 CRELD1Q96HD1 420 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 C9orf16Q9BUW7 83 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 SLC19A3Q9BZV2 496 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 C8orf4Q9NR00 106 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 TMED7Q9Y3B3 224 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 USP24Q9UPU5 2620 aa12.32□□□□□ -0.44
PRPF18-201ENST00000320054 TLN1Q9Y490 2541 aaKnown RBP12.32□□□□□ -0.44
PRPF18-201ENST00000320054 LAMA5O15230 3695 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 SAC3D1A6NKF1 404 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 ACOT7O00154 380 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF208O43345 1280 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 RASAL1O95294 804 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 IGF2P01344 180 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 FKBP2P26885 142 aaKnown RBP12.31□□□□□ -0.44
PRPF18-201ENST00000320054 ELK4P28324 431 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 B3GALT5-AS1P59052 145 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 PPIAP62937 165 aaKnown RBP12.31□□□□□ -0.44
PRPF18-201ENST00000320054 SEC23BQ15437 767 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms