RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TPBGQ13641 420 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 OXA1LQ15070 435 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CD226Q15762 336 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.95□□□□□ -1.3
IFT88-201ENST00000319980 PLK5Q496M5 336 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 KLHL26Q53HC5 615 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ZNF362Q5T0B9 420 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 NIPAL3Q6P499 406 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CBLN3Q6UW01 205 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 MEPCEQ7L2J0 689 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 GID4Q8IVV7 300 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CMIPQ8IY22 773 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 PRR22Q8IZ63 422 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ZNF485Q8NCK3 441 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 PSD4Q8NDX1 1056 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 OR7G1Q8NGA0 311 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 PHOSPHO1Q8TCT1 267 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ART5Q96L15 291 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 OR1F2PQ96R84 312 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ADOQ96SZ5 270 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 MROQ9BYG7 248 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 NRSN2Q9GZP1 204 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 FN3KQ9H479 309 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 UBQLN4Q9NRR5 601 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 FBXL4Q9UKA2 621 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 THADAQ6YHU6 1953 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 FRYLO94915 3013 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CACNA1IQ9P0X4 2223 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SMIM30A4D0T7 59 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 RIIAD1A6NNX1 92 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 EFCAB7A8K855 629 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 TAF4O00268 1085 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 IGHA1P01876 353 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 PEPDP12955 493 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 GALNSP34059 522 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 RORAP35398 523 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 RANBP1P43487 201 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 PPICP45877 212 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 EFNA3P52797 238 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 FOXL2P58012 376 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 RAB15P59190 212 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ZNF45Q02386 682 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 BIKQ13323 160 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CRMP1Q14194 572 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SPANXN2Q5MJ10 180 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ARHGAP40Q5TG30 622 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 LINC00114Q6XXX2 140 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SHISA6Q6ZSJ9 500 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 KLHL36Q8N4N3 616 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ACBD7Q8N6N7 88 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SLC2A12Q8TD20 617 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SPRYD4Q8WW59 207 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 SLC41A2Q96JW4 573 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CEP19Q96LK0 163 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 TEAD3Q99594 435 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ZNF649Q9BS31 505 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 TMED9Q9BVK6 235 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 HDHD5Q9BXW7 423 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ISG20L2Q9H9L3 353 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 MCCC2Q9HCC0 563 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 MKKSQ9NPJ1 570 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 MKL2Q9ULH7 1088 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SLC35A3Q9Y2D2 325 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 MMACHCQ9Y4U1 282 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 WDR87Q6ZQQ6 2873 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 TMEM131Q92545 1883 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 A0A087WUJ7 227 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 IGKV3D-11A0A0A0MRZ8 115 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CPED1A4D0V7 1026 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 AKAP8O43823 692 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 GMFGO60234 142 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 UPK1BO75841 260 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 HNRNPCP07910 306 aaKnown RBP eCLIP6.95□□□□□ -1.3
IFT88-201ENST00000319980 MRPL3P09001 348 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 FBLP22087 321 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 GTF2E2P29084 291 aaKnown RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 SDC2P34741 201 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 GPR143P51810 404 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 FABP5Q01469 135 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 RUNX1T1Q06455 604 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SHBQ15464 509 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ZSWIM7Q19AV6 140 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 TUBA3EQ6PEY2 450 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 APOOLQ6UXV4 268 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 QSOX2Q6ZRP7 698 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 KLBQ86Z14 1044 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 CARFQ8N187 725 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SYT14Q8NB59 555 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 OR10H4Q8NGA5 316 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SMAP2Q8WU79 429 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 DNAJA4Q8WW22 397 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 CCDC74AQ96AQ1 378 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 KCTD7Q96MP8 289 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 SLC46A1Q96NT5 459 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ERMAPQ96PL5 475 aaPredicted RBP6.95□□□□□ -1.3
IFT88-201ENST00000319980 ERVMER34-1Q9H9K5 563 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 FSCN3Q9NQT6 498 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 TBCCD1Q9NVR7 557 aa6.95□□□□□ -1.3
IFT88-201ENST00000319980 ATXN7L1Q9ULK2 861 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms