RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 BDH1Q02338 343 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 KCNAB1Q14722 419 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 EXOSC7Q15024 291 aaKnown RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 ZNF613Q6PF04 617 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 FIGNL1Q6PIW4 674 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 ZNF574Q6ZN55 896 aaPredicted RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 MEPCEQ7L2J0 689 aaKnown RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 TMPRSS9Q7Z410 1059 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 PIP4P1Q86T03 277 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 TMEM52Q8NDY8 209 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 BBS1Q8NFJ9 593 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 OR5T3Q8NGG3 340 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 DOK4Q8TEW6 326 aa13.07□□□□□ -0.32
VRK3-201ENST00000316763 ZNF768Q9H5H4 540 aaKnown RBP13.07□□□□□ -0.32
VRK3-201ENST00000316763 PTPRZ1P23471 2315 aaPredicted RBP13.06□□□□□ -0.32
VRK3-201ENST00000316763 SGK494L7N484 410 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 PEX12O00623 359 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 SOCS6O14544 535 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 OR10H2O60403 315 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 TMCC2O75069 709 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 SLC2A10O95528 541 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 SLC35E2P0CK97 266 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 IL7P13232 177 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 CELP19835 753 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 GALP22466 123 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 MAP3K8P41279 467 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 CASP3P42574 277 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 OR2B6P58173 313 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 MGAT2Q10469 447 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 GPR50Q13585 617 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
VRK3-201ENST00000316763 ZNHIT3Q15649 155 aaPredicted RBP13.06□□□□□ -0.32
VRK3-201ENST00000316763 ZNF79Q15937 498 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 GLYR1Q49A26 553 aaPredicted RBP13.06□□□□□ -0.32
VRK3-201ENST00000316763 ZNF322Q6U7Q0 402 aaPredicted RBP13.06□□□□□ -0.32
VRK3-201ENST00000316763 MARCH9Q86YJ5 346 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 LNX2Q8N448 690 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 ACBD7Q8N6N7 88 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 ZFP41Q8N8Y5 198 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 ATP6V1C2Q8NEY4 427 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 OR9A4Q8NGU2 314 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 IFI44Q8TCB0 444 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 SPRYD4Q8WW59 207 aaPredicted RBP13.06□□□□□ -0.32
VRK3-201ENST00000316763 MIXL1Q9H2W2 232 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 ITGB1BP2Q9UKP3 347 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 POLHQ9Y253 713 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 GVINP1Q7Z2Y8 2422 aa13.06□□□□□ -0.32
VRK3-201ENST00000316763 NPIPA5A0A0B4J1W7 369 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 NPIPA7E9PJI5 369 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 NKX2-2O95096 273 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 LYPD3O95274 346 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 NSA2O95478 260 aaKnown RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 ZGLP1P0C6A0 271 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 ANKRD34CP0C6C1 535 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 NPIPA8P0DM63 369 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 MAKP20794 623 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 ACP1P24666 158 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 AZGP1P25311 298 aaKnown RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 CD79BP40259 229 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 RNF144AP50876 292 aaPredicted RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 SKP1P63208 163 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 CCL7P80098 99 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 GRM7Q14831 915 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 CARTPTQ16568 116 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 ZNF791Q3KP31 576 aaPredicted RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 SNAP47Q5SQN1 464 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 AGAP6Q5VW22 663 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 ZNF544Q6NX49 715 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 NIPAL3Q6P499 406 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 PLBD1Q6P4A8 553 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 MZT2AQ6P582 158 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 TMPRSS11FQ6ZWK6 438 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 VWA5B2Q8N398 1253 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 OR4D9Q8NGE8 314 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 OR51G2Q8NGK0 314 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 PFN4Q8NHR9 129 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 NACC2Q96BF6 587 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 CTHRC1Q96CG8 243 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 BPIFA2Q96DR5 249 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 AGAP4Q96P64 663 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 TMED9Q9BVK6 235 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 SPRTNQ9H040 489 aaPredicted RBP13.05□□□□□ -0.32
VRK3-201ENST00000316763 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 SYNDIG1Q9H7V2 258 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 TIGARQ9NQ88 270 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 INPP5EQ9NRR6 644 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 FBXO34Q9NWN3 711 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 KCNE5Q9UJ90 142 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 GXYLT2A0PJZ3 443 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 BHLHE40O14503 412 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 HCN1O60741 890 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 RDH16O75452 317 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 GUSBP08236 651 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 CT62P0C5K7 136 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 FOLR1P15328 257 aa13.05□□□□□ -0.32
VRK3-201ENST00000316763 PTNP21246 168 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms