RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 FAM25EA8MYX2 175 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 TLX3O43711 291 aaPredicted RBP12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 SLC2A10O95528 541 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 MAOAP21397 527 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 MAN2A2P49641 1150 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF620Q6ZNG0 422 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 BAHD1Q8TBE0 780 aaPredicted RBP12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 MSLNLQ96KJ4 702 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF717Q9BY31 904 aaPredicted RBP12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 MLC1Q15049 377 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 HES5Q5TA89 166 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 FAM160A2Q8N612 972 aaPredicted RBP12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 CLDN22Q8N7P3 220 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 HINT3Q9NQE9 182 aaKnown RBP12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 UBQLN4Q9NRR5 601 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 GPATCH2Q9NW75 528 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 EIF3KQ9UBQ5 218 aaKnown RBP12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 C5orf67F2Z3F1 127 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 HMGA2P52926 109 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 ARTNQ5T4W7 220 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 AGAP6Q5VW22 663 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 DHRS1Q96LJ7 313 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 AGAP4Q96P64 663 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 ORAI3Q9BRQ5 295 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 OR10A5Q9H207 317 aa12.44□□□□□ -0.42
PCDHB9-201ENST00000316105 TVP23AA6NH52 213 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF41P51814 821 aaPredicted RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 GMFBP60983 142 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 SNTB2Q13425 540 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 KCTD18Q6PI47 426 aaPredicted RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 MAMDC2Q7Z304 686 aaPredicted RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 AKAP1Q92667 903 aaKnown RBP eCLIP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 TMEM246Q9BRR3 403 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 PLA2G12AQ9BZM1 189 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 MRPL15Q9P015 296 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ANKRD36A6QL64 1941 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 TMEM129A0AVI4 362 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF726A6NNF4 738 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 GALR3O60755 368 aaPredicted RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 APEX1P27695 318 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 GRK5P34947 590 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 CSNK1EP49674 416 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 FGL2Q14314 439 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 GXYLT1Q4G148 440 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 CADM3Q8N126 398 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 CELF2-AS1Q8N7Q2 184 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 STACQ99469 402 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 INPP5EQ9NRR6 644 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 CUTCQ9NTM9 273 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ASCC3Q8N3C0 2202 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ZC3H12DA2A288 527 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 MEIOCA2RUB1 952 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 TMEM221A6NGB7 291 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 C9J4A7 227 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 I3L521 148 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 AQP9O43315 295 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 MAS1P04201 325 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 THBS1P07996 1170 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 COL9A1P20849 921 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ENDOUP21128 410 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 PRKACBP22694 351 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ADH7P40394 386 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 MANEAQ5SRI9 462 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF782Q6ZMW2 699 aaPredicted RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 GPAT4Q86UL3 456 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 KATNB1Q9BVA0 655 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 GTPBP2Q9BX10 602 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 CACNG6Q9BXT2 260 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 SLIRPQ9GZT3 109 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 DHCR7Q9UBM7 475 aaKnown RBP12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF337Q9Y3M9 751 aa12.43□□□□□ -0.42
PCDHB9-201ENST00000316105 SERINC4A6NH21 518 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 CTNSO60931 367 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 F13BP05160 661 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 CSN2P05814 226 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 PITPNBP48739 271 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 EMP3P54852 163 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 ZNF613Q6PF04 617 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 RBP7Q96R05 134 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 CMKLR1Q99788 373 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 SLC25A18Q9H1K4 315 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 UCKL1Q9NWZ5 548 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 SULT1C4O75897 302 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 KLK3P07288 261 aaPredicted RBP12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 ADAM8P78325 824 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 DUSP8Q13202 625 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 C15orf40Q8WUR7 153 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 LMF2Q9BU23 707 aaKnown RBP12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 NDUFB11Q9NX14 153 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 EXO1Q9UQ84 846 aaKnown RBP12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 PCYT1BQ9Y5K3 369 aaPredicted RBP12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 CTSVO60911 334 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 WBP2NLQ6ICG8 309 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 FBXO42Q6P3S6 717 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 BBS1Q8NFJ9 593 aa12.42□□□□□ -0.42
PCDHB9-201ENST00000316105 ZFPM2Q8WW38 1151 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms