RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PSMF1Q92530 271 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 ZNF524Q96C55 264 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 NXPE2Q96DL1 559 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 SGCZQ96LD1 299 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 YTHDF1Q9BYJ9 559 aaKnown RBP20.52■□□□□ 0.88
IRF3-201ENST00000309877 ZNF696Q9H7X3 374 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 CPNE5Q9HCH3 593 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 IMPAD1Q9NX62 359 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 EXPH5Q8NEV8 1989 aa20.52■□□□□ 0.88
IRF3-201ENST00000309877 CNOT1A5YKK6 2376 aaKnown RBP20.52■□□□□ 0.88
IRF3-201ENST00000309877 EFCAB9A8MZ26 197 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 CDC42EP2O14613 210 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 CTU2Q2VPK5 515 aaKnown RBP20.51■□□□□ 0.87
IRF3-201ENST00000309877 PRAMEF20Q5VT98 475 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 SLC22A10Q63ZE4 541 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 TMEM81Q6P7N7 255 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 TMEM154Q6P9G4 183 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 PAQR8Q8TEZ7 354 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 TMEM234Q8WY98 164 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 SLC19A3Q9BZV2 496 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 ADNPQ9H2P0 1102 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 EGLN3Q9H6Z9 239 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 CFAP54Q96N23 3096 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 ENO4A6NNW6 628 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 CDK5R2Q13319 367 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 C6orf141Q5SZD1 244 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 ZNF468Q5VIY5 522 aaPredicted RBP20.51■□□□□ 0.87
IRF3-201ENST00000309877 RTL4Q6ZR62 310 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 OSTF1Q92882 214 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 TMEM43Q9BTV4 400 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 LHPPQ9H008 270 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 RASSF1Q9NS23 344 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 STMN3Q9NZ72 180 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 RNF6Q9Y252 685 aa20.51■□□□□ 0.87
IRF3-201ENST00000309877 IGLV3-32A0A0A0MS00 114 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 CCL3P10147 92 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 POLR2HP52434 150 aaKnown RBP20.5■□□□□ 0.87
IRF3-201ENST00000309877 GINS1Q14691 196 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 MAD2L1BPQ15013 274 aaPredicted RBP20.5■□□□□ 0.87
IRF3-201ENST00000309877 ABHD17BQ5VST6 288 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 SLX4IPQ5VYV7 408 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 POMZP3Q6PJE2 187 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 CASP12Q6UXS9 341 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 GRINAQ7Z429 371 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 ENTHD1Q8IYW4 607 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 CYP4Z2PQ8N1L4 340 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 CNIH3Q8TBE1 160 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 FBLIM1Q8WUP2 373 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 HDAC2Q92769 488 aaKnown RBP20.5■□□□□ 0.87
IRF3-201ENST00000309877 UBE2FQ969M7 185 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 SGTBQ96EQ0 304 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 PLA2G12AQ9BZM1 189 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 ANKRD10Q9NXR5 420 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 OSGIN1Q9UJX0 560 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 CDH10Q9Y6N8 788 aa20.5■□□□□ 0.87
IRF3-201ENST00000309877 PTPRZ1P23471 2315 aaPredicted RBP20.5■□□□□ 0.87
IRF3-201ENST00000309877 HEATR5AQ86XA9 2040 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 SMNDC1O75940 238 aaKnown RBP eCLIP20.49■□□□□ 0.873e-6■■■□□ 15.3
IRF3-201ENST00000309877 CCNA2P20248 432 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 HTR3AP46098 478 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 GIPRP48546 466 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 SMSP52788 366 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 RBM48Q5RL73 367 aaKnown RBP20.49■□□□□ 0.87
IRF3-201ENST00000309877 ATP1A1-AS1Q5TC04 95 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 BROXQ5VW32 411 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 ZNF620Q6ZNG0 422 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 GPALPP1Q8IXQ4 340 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 BEST3Q8N1M1 668 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 IQCF1Q8N6M8 205 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 CLDN22Q8N7P3 220 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 OR4K17Q8NGC6 315 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 ST8SIA1Q92185 356 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 ANGPTL4Q9BY76 406 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 SH2D2AQ9NP31 389 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 TBC1D23Q9NUY8 699 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 ABI3Q9P2A4 366 aa20.49■□□□□ 0.87
IRF3-201ENST00000309877 IGKV1D-42A0A075B6H8 117 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 HTR3EA5X5Y0 456 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 CYB561P49447 251 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 HLCSP50747 726 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 ZNF41P51814 821 aaPredicted RBP20.48■□□□□ 0.87
IRF3-201ENST00000309877 RRADP55042 308 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 CDK5Q00535 292 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 FOXC1Q12948 553 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 TOP3AQ13472 1001 aaPredicted RBP20.48■□□□□ 0.87
IRF3-201ENST00000309877 TBC1D25Q3MII6 688 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 KCTD21Q4G0X4 260 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 SLC27A4Q6P1M0 643 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 THAP4Q8WY91 577 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 TSSK6Q9BXA6 273 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 IL20Q9NYY1 176 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 AASSQ9UDR5 926 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 PCDHGB6Q9Y5F9 930 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 TMED7-TICAM2A0A0A6YYA0 188 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 FAM47E-STBD1D6RA91 191 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 MPZL2O60487 215 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 SLC25A12O75746 678 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 RCBTB2O95199 551 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 FUT1P19526 365 aa20.48■□□□□ 0.87
IRF3-201ENST00000309877 OC90Q02509 493 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms