RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 H2AFXP16104 143 aaPredicted RBP17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 PGCP20142 388 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 PSMB1P20618 241 aaKnown RBP17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 KCNJ5P48544 419 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 MERTKQ12866 999 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 RNPS1Q15287 305 aaKnown RBP17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 EXOC3L2Q2M3D2 409 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 ADGRG3Q86Y34 549 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 GTF2H4Q92759 462 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 MED18Q9BUE0 208 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 TMUB1Q9BVT8 246 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 RSPO3Q9BXY4 272 aaPredicted RBP17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 KLHL4Q9C0H6 718 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 TPT1P8Q9HAU6 139 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 CTPS2Q9NRF8 586 aa17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.63■□□□□ 0.41
PDZRN3-202ENST00000308537 TFPTP0C1Z6 253 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 PABPC4LP0CB38 370 aaKnown RBP17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 ETFAP13804 333 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 DNASE1P24855 282 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 MAGEA8P43361 318 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 IDH3AP50213 366 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 POLR2JP52435 117 aaKnown RBP17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 SYT14P1Q58G82 188 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 TMPPEQ6ZT21 453 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 CXorf67Q86X51 503 aaPredicted RBP17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 TMEM234Q8WY98 164 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 ARL5BQ96KC2 179 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 PAIP1Q9H074 479 aaKnown RBP17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 C12orf49Q9H741 205 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 TIGARQ9NQ88 270 aa17.62■□□□□ 0.41
PDZRN3-202ENST00000308537 FAM234BA2RU67 622 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 ZNF814B7Z6K7 855 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 CASKO14936 926 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 CYTIPO60759 359 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 PRKD3O94806 890 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 TGDSO95455 350 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 KRT75O95678 551 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 RYKP34925 604 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 DIO1P49895 249 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 DEFB113Q30KQ7 82 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 MRPL2Q5T653 305 aaKnown RBP17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 GTF2IRD2BQ6EKJ0 949 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 ABLIM2Q6H8Q1 611 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 SEZ6L2Q6UXD5 910 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 BEND4Q6ZU67 534 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 GRINAQ7Z429 371 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 GTF2IRD2Q86UP8 949 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 MSRB3Q8IXL7 192 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 CMIPQ8IY22 773 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 MIER2Q8N344 545 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 SLC43A2Q8N370 569 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 SLC38A5Q8WUX1 472 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 ZC3HAV1LQ96H79 300 aaKnown RBP17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 OR5B2Q96R09 309 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 ZNF300Q96RE9 604 aaPredicted RBP17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 MTHFD2LQ9H903 347 aaPredicted RBP17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 VIPAS39Q9H9C1 493 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 TCF7L2Q9NQB0 619 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 ZNF226Q9NYT6 803 aa17.61■□□□□ 0.41
PDZRN3-202ENST00000308537 FAAHO00519 579 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 YES1P07947 543 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 BMP2P12643 396 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 SLC7A1P30825 629 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 APOBEC1P41238 236 aaKnown RBP17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 HPCAP84074 193 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 FBXW10Q5XX13 1052 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 SLC2A7Q6PXP3 512 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 TGIF2LYQ8IUE0 185 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 C10orf111Q8N326 155 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 SLC25A43Q8WUT9 341 aaPredicted RBP17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 WDR60Q8WVS4 1066 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 IGFBPL1Q8WX77 278 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 PMM1Q92871 262 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 ITCHQ96J02 903 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 OR11A1Q9GZK7 315 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 OR10A4Q9H209 315 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 SLC25A37Q9NYZ2 338 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 SLAMF8Q9P0V8 285 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 CHRNA9Q9UGM1 479 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 PCDHB14Q9Y5E9 798 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 USF3Q68DE3 2245 aa17.6■□□□□ 0.41
PDZRN3-202ENST00000308537 PLCE1Q9P212 2302 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 CDHR4A6H8M9 788 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 ZNF716A6NP11 495 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 RAMP1O60894 148 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 NUDT7P0C024 238 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 NR2F1P10589 423 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 NTF4P34130 210 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 ACAA2P42765 397 aaKnown RBP17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 IDH2P48735 452 aaKnown RBP17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 ADAM8P78325 824 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 EPS8Q12929 822 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 TMEM201Q5SNT2 666 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 BLOC1S3Q6QNY0 202 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 ZNF836Q6ZNA1 936 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 VRK2Q86Y07 508 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 ARFGAP2Q8N6H7 521 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 LRRC8CQ8TDW0 803 aa17.59■□□□□ 0.41
PDZRN3-202ENST00000308537 PIK3IP1Q96FE7 263 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms