RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CRISP3P54108 245 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 CSNK2A1P68400 391 aaPredicted RBP23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 SYT14P1Q58G82 188 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 CNOT9Q92600 299 aaKnown RBP23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 MAGEB18Q96M61 343 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 LIME1Q9H400 295 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 RAD21L1Q9H4I0 556 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 C12orf49Q9H741 205 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 KLHL9Q9P2J3 617 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 UQCRBP14927 111 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 PPP3CBP16298 524 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 ENPP1P22413 925 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 HTR3AP46098 478 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 PLAURQ03405 335 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 POU4F3Q15319 338 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 GTDC1Q4AE62 458 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 SLC2A7Q6PXP3 512 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 PAMR1Q6UXH9 720 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 CKAP2Q8WWK9 683 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 CTPS2Q9NRF8 586 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 CCM2LQ9NUG4 571 aaPredicted RBP23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 TMEM45AQ9NWC5 275 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 CHRNA9Q9UGM1 479 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 PCDHB14Q9Y5E9 798 aa23.57■■□□□ 1.36
CDKN2A-201ENST00000304494 HEATR5AQ86XA9 2040 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 BCHEP06276 602 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 YES1P07947 543 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 TFPTP0C1Z6 253 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 CRYGSP22914 178 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 IDH2P48735 452 aaKnown RBP23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 DIO1P49895 249 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 LIN52Q52LA3 116 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 BLOC1S3Q6QNY0 202 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 TMPPEQ6ZT21 453 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 TUSC5Q8IXB3 177 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 ZNF440Q8IYI8 595 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 AURKBQ96GD4 344 aaPredicted RBP23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 FOXC2Q99958 501 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 PAIP1Q9H074 479 aaKnown RBP23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 PLEKHF2Q9H8W4 249 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 CACYBPQ9HB71 228 aaKnown RBP23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 PRDM4Q9UKN5 801 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 PLEKHA6Q9Y2H5 1048 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 HRNRQ86YZ3 2850 aaPredicted RBP23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 DSPPQ9NZW4 1301 aa23.56■■□□□ 1.36
CDKN2A-201ENST00000304494 CELSR1Q9NYQ6 3014 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 MPDZO75970 2070 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 A0A096LPI6 279 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 IGHV3-15A0A0B4J1V0 119 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 SULT2B1O00204 365 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 CLIC1O00299 241 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 FAAHO00519 579 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 TFPIP10646 304 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 CLK1P49759 484 aaKnown RBP23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 ATP4BP51164 291 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 MAPK11Q15759 364 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 MRPL2Q5T653 305 aaKnown RBP23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 STAC2Q6ZMT1 411 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 ZNF550Q7Z398 422 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 SLC38A5Q8WUX1 472 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 STON2Q8WXE9 905 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 SPDL1Q96EA4 605 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 BCO1Q9HAY6 547 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 CCDC167Q9P0B6 97 aa23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 C6orf203Q9P0P8 240 aaPredicted RBP23.55■■□□□ 1.36
CDKN2A-201ENST00000304494 CFAP73A6NFT4 308 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 NR5A2O00482 541 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 CYTIPO60759 359 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 ADAM11O75078 769 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 RAF1P04049 648 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 FADDQ13158 208 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 RGNQ15493 299 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 ZSWIM7Q19AV6 140 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 FUNDC1Q8IVP5 155 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 OR52P1PQ8NH57 321 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 ZHX1-C8orf76Q96EF9 292 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 PSD2Q9BQI7 771 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 OR10A4Q9H209 315 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 GPR52Q9Y2T5 361 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 HDGFL3Q9Y3E1 203 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 SPG11Q96JI7 2443 aa23.54■■□□□ 1.36
CDKN2A-201ENST00000304494 A0A0G2JPF8 293 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 CDHR4A6H8M9 788 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 HNRNPCL2B2RXH8 293 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 HNRNPCL3B7ZW38 293 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 AP3D1O14617 1153 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 SMAD9O15198 467 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 HNRNPCL1O60812 293 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 HNRNPCL4P0DMR1 293 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 POLR2HP52434 150 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 RASGEF1BQ0VAM2 473 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 KEAP1Q14145 624 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 SQLEQ14534 574 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 LARS2Q15031 903 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 ANKRD34AQ69YU3 496 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 TFAP2EQ6VUC0 442 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 NUFIP2Q7Z417 695 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 ADGRG3Q86Y34 549 aa23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 ZC3HAV1LQ96H79 300 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-201ENST00000304494 TMEM19Q96HH6 336 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms