RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 UBE2NLQ5JXB2 153 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 ZDHHC14Q8IZN3 488 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 OR10AD1Q8NGE0 317 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 OR10X1Q8NGY0 326 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 GPR148Q8TDV2 347 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 TNFRSF19Q9NS68 423 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 LAP3P28838 519 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 PRPS1P60891 318 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 HSF1Q00613 529 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 GK3PQ14409 553 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 MS4A13Q5J8X5 152 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 PLPP5Q8NEB5 264 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 RHEBL1Q8TAI7 183 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 LURAP1Q96LR2 239 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 MVB12BQ9H7P6 319 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 INSL5Q9Y5Q6 135 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 EDN1P05305 212 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 ATP1B3P54709 279 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 EMP2P54851 167 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 OR52A5Q9H2C5 316 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 HEBP1Q9NRV9 189 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 SUSD2Q9UGT4 822 aa13.38□□□□□ -0.27
HIPK3-201ENST00000303296 TMEM235A6NFC5 223 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 A6NIZ1 184 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 MTCP1P56278 107 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 RAP1BP61224 184 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 RAP1AP62834 184 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 ZNF662Q6ZS27 426 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
HIPK3-201ENST00000303296 KDF1Q8NAX2 398 aaPredicted RBP13.37□□□□□ -0.27
HIPK3-201ENST00000303296 M1APQ8TC57 530 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 C4orf36Q96KX1 117 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 ANTXRLA6NF34 631 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 HEPACAM2A8MVW5 462 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 APBB3O95704 486 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 ACRV1P26436 265 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 ZNF574Q6ZN55 896 aaPredicted RBP13.37□□□□□ -0.27
HIPK3-201ENST00000303296 OR13C9Q8NGT0 318 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 ST8SIA2Q92186 375 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 MACROD1Q9BQ69 325 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 GABRQQ9UN88 632 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 PMS2P1A4D2B8 440 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 ATP6V1G2-DDX39BF2Z307 99 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 SEMA4FO95754 770 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 CNR2P34972 360 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 PTGER1P34995 402 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 CXCR4P61073 352 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 PIP5KL1Q5T9C9 394 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 DUSP22Q9NRW4 184 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 NPTNQ9Y639 398 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 MEGF11A6BM72 1044 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 HOXD12P35452 270 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 PSMB3P49720 205 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 MYBPHQ13203 477 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 NDUFAF7Q7L592 441 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 ULBP3Q9BZM4 244 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 FAM96BQ9Y3D0 163 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 HLA-HP01893 362 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 EPGNQ6UW88 154 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 LCTLQ6UWM7 567 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 SSX9Q7RTT3 188 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 NUBP2Q9Y5Y2 271 aa13.37□□□□□ -0.27
HIPK3-201ENST00000303296 NCBP2LA6PVI3 153 aaKnown RBP13.36□□□□□ -0.27
HIPK3-201ENST00000303296 HS3ST1O14792 307 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 BCAT2O15382 392 aaPredicted RBP13.36□□□□□ -0.27
HIPK3-201ENST00000303296 TPOP07202 933 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 CDK4P11802 303 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 GIFP27352 417 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 IL1R2P27930 398 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 SLC16A14Q7RTX9 510 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 KIAA1191Q96A73 305 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 HRASLS5Q96KN8 279 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 MAF1Q9H063 256 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 NSG1A0A0A6YYJ2 146 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 CSF1P09603 554 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 USF1P22415 310 aaPredicted RBP13.36□□□□□ -0.27
HIPK3-201ENST00000303296 ACKR1Q16570 336 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.36□□□□□ -0.27
HIPK3-201ENST00000303296 MICAQ29983 383 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 OR52E8Q6IFG1 317 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 SYT13Q7L8C5 426 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 OR9Q2Q8NGE9 314 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 TRIB1Q96RU8 372 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 NDFIP1Q9BT67 221 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 ULBP2Q9BZM5 246 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 FAM117AQ9C073 453 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 LINC00597Q9H2U6 94 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 OR6C76A6NM76 312 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 RFXAPO00287 272 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 NPPAP01160 153 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 PROS1P07225 676 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 ITGAMP11215 1152 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 CD6P30203 668 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 CPEB2Q7Z5Q1 589 aaKnown RBP13.36□□□□□ -0.27
HIPK3-201ENST00000303296 OR1S2Q8NGQ3 325 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 NOX3Q9HBY0 568 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 M0R3H8 397 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 LYRM1O43325 122 aa13.36□□□□□ -0.27
HIPK3-201ENST00000303296 GOSR1O95249 250 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms