RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SLC25A21Q9BQT8 299 aaPredicted RBP7.17□□□□□ -1.26
SF3B3-201ENST00000302516 NIPSNAP3BQ9BS92 247 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 CERS4Q9HA82 394 aa7.17□□□□□ -1.26
SF3B3-201ENST00000302516 PSMB1P20618 241 aaKnown RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TNFSF4P23510 183 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF136P52737 540 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 FIGNL1Q6PIW4 674 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SLC51BQ86UW2 128 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 OR6F1Q8NGZ6 308 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MSLNLQ96KJ4 702 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 A4GALTQ9NPC4 353 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PRMT8Q9NR22 394 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 DIMT1Q9UNQ2 313 aaKnown RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 CAMK2AQ9UQM7 478 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ARFGEF1Q9Y6D6 1849 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 C2orf72A6NCS6 295 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF860A6NHJ4 632 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MAN2B1O00754 1011 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TYRP1P17643 537 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 NFYBP25208 207 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 UBE2KP61086 200 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ENTHD1Q8IYW4 607 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 OR5H6Q8NGV6 325 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 UTP4Q969X6 686 aaKnown RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 HSFX1Q9UBD0 423 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 LOC102723532A0A0G2JNH3 316 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MROH6A6NGR9 719 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 M0R3H8 397 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 BMP4P12644 408 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MGAT3Q09327 533 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ASAH1Q13510 395 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PAPD4Q6PIY7 484 aaKnown RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 GPRIN1Q7Z2K8 1008 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 LIX1LQ8IVB5 337 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ABHD5Q8WTS1 349 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 RADILQ96JH8 1075 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 UHRF2Q96PU4 802 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 CDH20Q9HBT6 801 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 REV1Q9UBZ9 1251 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PSORS1C1Q9UIG5 152 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ARHGAP33O14559 1287 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ACTL6BO94805 426 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 OR2T7P0C7T2 308 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PRLHRP49683 370 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TSPAN31Q12999 210 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 DUSP6Q16828 381 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TP53I3Q53FA7 332 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SLC7A5P1Q8MH63 180 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 OR2T27Q8NH04 317 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 GGHQ92820 318 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ZMYND19Q96E35 227 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SYT11Q9BT88 431 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 C20orf85Q9H1P6 137 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 C8orf33Q9H7E9 229 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 METTL17Q9H7H0 456 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 RPH3AQ9Y2J0 694 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PLEKHM1Q9Y4G2 1056 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 WIF1Q9Y5W5 379 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TRDV1A0A1B0GX56 115 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 LALBAP00709 142 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PTHP01270 115 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 CNR1P21554 472 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 STK19P49842 368 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 DBPQ10586 325 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF74Q16587 644 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PIP5KL1Q5T9C9 394 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TIGD3Q6B0B8 471 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MR1Q95460 341 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF582Q96NG8 517 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PCYT2Q99447 389 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 C16orf70Q9BSU1 422 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SLC25A18Q9H1K4 315 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 C1GALT1Q9NS00 363 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 IER3IP1Q9Y5U9 82 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TDRD15B5MCY1 1934 aaKnown RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 hCG_1807616A0A1W2PRN6 198 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 GABARAPO95166 117 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PIPP12273 146 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 HLA-DMAP28067 261 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SLC35G1Q2M3R5 365 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SYT6Q5T7P8 510 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MRPL21Q7Z2W9 205 aaKnown RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 KIAA1551Q9HCM1 1747 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 IGKV6D-21A0A0A0MT36 114 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 TCRBV21S2A2A0A5A6 115 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 IGLON5A6NGN9 336 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SEC14L5O43304 696 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 KLF8O95600 359 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 BTN1A1Q13410 526 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MAMDC4Q6UXC1 1216 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 Q6ZNX1 250 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF808Q8N4W9 903 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ANKRD9Q96BM1 317 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PRELID3BQ9Y3B1 194 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 H7C1Q1 480 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 AQP9O43315 295 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SCGB1D1O95968 90 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 POU3F3P20264 500 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ATP1B3P54709 279 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 CASP6P55212 293 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms