RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 LAPTM4BQ86VI4 370 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 COMMD7Q86VX2 200 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 OR10H4Q8NGA5 316 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CEP76Q8TAP6 659 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CNOT9Q92600 299 aaKnown RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 MMABQ96EY8 250 aaPredicted RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CRELD1Q96HD1 420 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 MND1Q9BWT6 205 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 SRRQ9GZT4 340 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 ZSCAN32Q9NX65 697 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 KCNE5Q9UJ90 142 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 DTX4Q9Y2E6 619 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 OR10H1Q9Y4A9 318 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 SH3D21A4FU49 640 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 DUXAA6NLW8 204 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CHST10O43529 356 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 HRO43593 1189 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 TBX19O60806 448 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 APBB3O95704 486 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 GFERP55789 205 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 KIAA1024LP59773 190 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 ATCAYQ86WG3 371 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 TM9SF4Q92544 642 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 PIGKQ92643 395 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 DIO2Q92813 273 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 KLHDC7BQ96G42 594 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 SPACA7Q96KW9 195 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 LMF1Q96S06 567 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 NELL2Q99435 816 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 GSDMCQ9BYG8 508 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CHIAQ9BZP6 476 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 RDH8Q9NYR8 311 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 WSB2Q9NYS7 404 aaPredicted RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 IL20Q9NYY1 176 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 EIF3KQ9UBQ5 218 aaKnown RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 PPIEQ9UNP9 301 aaKnown RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 SLC22A7Q9Y694 548 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 DSPPQ9NZW4 1301 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CDC14CA4D256 554 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 HPGDSO60760 199 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 RAB36O95755 333 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 LALBAP00709 142 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 ZNF10P21506 573 aaPredicted RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 HCCSP53701 268 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 MAB21L1Q13394 359 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 NCF4Q15080 339 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 C12orf73Q69YU5 71 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 C1orf94Q6P1W5 598 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CFAP77Q6ZQR2 320 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 SHISA6Q6ZSJ9 500 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 KLBQ86Z14 1044 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 TSTD1Q8NFU3 115 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 FLVCR1-AS1Q8TAF5 88 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 RADILQ96JH8 1075 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 DCLRE1CQ96SD1 692 aaKnown RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 SLC38A3Q99624 504 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 FOXQ1Q9C009 403 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 MTHFD2LQ9H903 347 aaPredicted RBP9.35□□□□□ -0.91
FOXN4-201ENST00000299162 SLC25A19Q9HC21 320 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 BCL2L10Q9HD36 194 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 CACNG2Q9Y698 323 aa9.35□□□□□ -0.91
FOXN4-201ENST00000299162 FREM2Q5SZK8 3169 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 FAM171A2A8MVW0 826 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 PSMD9O00233 223 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 BET1O15155 118 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 STX11O75558 287 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 HTR2AP28223 471 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 IFNGR2P38484 337 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 CTBP2P56545 445 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 FZD2Q14332 565 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 MLC1Q15049 377 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 OR1Q1Q15612 314 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 METTL11BQ5VVY1 283 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 OTPQ5XKR4 325 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 C10orf53Q8N6V4 93 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 SFXN5Q8TD22 340 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 GNPDA2Q8TDQ7 276 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 RBM14Q96PK6 669 aaKnown RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 HCAR1Q9BXC0 346 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 CDCA4Q9BXL8 241 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 SYNDIG1Q9H7V2 258 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 MMP17Q9ULZ9 603 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 LIPT1Q9Y234 373 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 INMT-MINDY4F8WBC2 141 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 GPR75O95800 540 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 PRKAR1AP10644 381 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 BMP7P18075 431 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 MAKP20794 623 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 PAICSP22234 425 aaKnown RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 OR1D4P47884 311 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 PSPHP78330 225 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 IL20RBQ6UXL0 311 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 SLC36A4Q6YBV0 504 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 PRR22Q8IZ63 422 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 SMRP1Q8NCR6 262 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 C9orf43Q8TAL5 461 aaPredicted RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 BAHD1Q8TBE0 780 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms