RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 OR4C3Q8NH37 302 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 SPRTNQ9H040 489 aaPredicted RBP18.38■□□□□ 0.53
CXCL16-201ENST00000293778 MKKSQ9NPJ1 570 aaPredicted RBP18.38■□□□□ 0.53
CXCL16-201ENST00000293778 EFCAB7A8K855 629 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 POLR1CO15160 346 aaPredicted RBP18.38■□□□□ 0.53
CXCL16-201ENST00000293778 NCR1O76036 304 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 MT-ND5P03915 603 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 SBK2P0C263 348 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 ATXN8OSP0DMR3 200 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 GPR143P51810 404 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 DEFB133Q30KQ1 61 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 C1QTNF12Q5T7M4 302 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 IL17RDQ8NFM7 739 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 ATF6BQ99941 703 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 ADGRL4Q9HBW9 690 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 FBXL4Q9UKA2 621 aa18.38■□□□□ 0.53
CXCL16-201ENST00000293778 CD1CP29017 333 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 RACK1P63244 317 aaKnown RBP18.37■□□□□ 0.53
CXCL16-201ENST00000293778 TAB1Q15750 504 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 C17orf82Q86X59 251 aaPredicted RBP18.37■□□□□ 0.53
CXCL16-201ENST00000293778 OR5W2Q8NH69 310 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 KIAA1143Q96AT1 154 aaPredicted RBP18.37■□□□□ 0.53
CXCL16-201ENST00000293778 ERMAPQ96PL5 475 aaPredicted RBP18.37■□□□□ 0.53
CXCL16-201ENST00000293778 PELOQ9BRX2 385 aaKnown RBP18.37■□□□□ 0.53
CXCL16-201ENST00000293778 NDC1Q9BTX1 674 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 KCNN2Q9H2S1 579 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 H0YIG0 161 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 RFX2P48378 723 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 SERTAD2Q14140 314 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 PYDC2Q56P42 97 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 SMPDL3BQ92485 455 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 SGTBQ96EQ0 304 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 PRODH2Q9UF12 536 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 GON4LQ3T8J9 2241 aa18.37■□□□□ 0.53
CXCL16-201ENST00000293778 SPTBP11277 2137 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 LINC00854A0A1B0GVQ3 168 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 DVL2O14641 736 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 NDUFB2O95178 105 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 CLPSP04118 112 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 GYPBP06028 91 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 CSF3P09919 207 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.36■□□□□ 0.53
CXCL16-201ENST00000293778 GPALPP1Q8IXQ4 340 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 OR5M3Q8NGP4 307 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 SLC2A12Q8TD20 617 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 HAO2Q9NYQ3 351 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 SERTAD3Q9UJW9 196 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 PAIP2BQ9ULR5 123 aaKnown RBP18.36■□□□□ 0.53
CXCL16-201ENST00000293778 MAU2Q9Y6X3 613 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 THADAQ6YHU6 1953 aa18.36■□□□□ 0.53
CXCL16-201ENST00000293778 FITM1A5D6W6 292 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 HPGDSO60760 199 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 GALNSP34059 522 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 CASP3P42574 277 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 GRM7Q14831 915 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 UBXN2BQ14CS0 331 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 NKAIN2Q5VXU1 208 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 FAM98AQ8NCA5 519 aaKnown RBP18.35■□□□□ 0.53
CXCL16-201ENST00000293778 NLGN4YQ8NFZ3 816 aaPredicted RBP18.35■□□□□ 0.53
CXCL16-201ENST00000293778 OR52E2Q8NGJ4 325 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 CHAC2Q8WUX2 184 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 NEDD4LQ96PU5 975 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 RNF32Q9H0A6 362 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 TTYH1Q9H313 450 aaPredicted RBP18.35■□□□□ 0.53
CXCL16-201ENST00000293778 INIPQ9NRY2 104 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 EPHA6Q9UF33 1036 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 CHRNA9Q9UGM1 479 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 A0A087WUJ7 227 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 C17orf105B2RV13 164 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 E9PI62 339 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 SDC3O75056 442 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 POU3F3P20264 500 aaPredicted RBP18.35■□□□□ 0.53
CXCL16-201ENST00000293778 CFL1P23528 166 aaKnown RBP18.35■□□□□ 0.53
CXCL16-201ENST00000293778 TMED10P49755 219 aaKnown RBP18.35■□□□□ 0.53
CXCL16-201ENST00000293778 ZNF85Q03923 595 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 POU4F2Q12837 409 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 ASAH1Q13510 395 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 MZT2AQ6P582 158 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 CNIH2Q6PI25 160 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 ARL9Q6T311 187 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 EFHD2Q96C19 240 aaPredicted RBP18.35■□□□□ 0.53
CXCL16-201ENST00000293778 ZDHHC12Q96GR4 267 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 CHRDQ9H2X0 955 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 ICAM5Q9UMF0 924 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 GRIP1Q9Y3R0 1128 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 CACNA1IQ9P0X4 2223 aa18.35■□□□□ 0.53
CXCL16-201ENST00000293778 LMO7DNF2Z398 122 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 OR2B6P58173 313 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 HNRNPKP61978 463 aaKnown RBP eCLIP18.34■□□□□ 0.538e-7■□□□□ 9.6
CXCL16-201ENST00000293778 ACTC1P68032 377 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 ACTA1P68133 377 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 DAB2P98082 770 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 MADCAM1Q13477 382 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 KCNAB1Q14722 419 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 C14orf28Q4W4Y0 310 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 AGAP6Q5VW22 663 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 LRRC17Q8N6Y2 441 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 SDR9C7Q8NEX9 313 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 CADM4Q8NFZ8 388 aa18.34■□□□□ 0.53
CXCL16-201ENST00000293778 OR4K13Q8NH42 304 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms