RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TTTY10Q9BZA0 68 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 DMRT3Q9NQL9 472 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 KCMF1Q9P0J7 381 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 A0A0A6YYC8 382 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 A6NL46 340 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 I3L1I5 382 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SMAD9O15198 467 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 NUDT21O43809 227 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 KIAA0513O60268 411 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FUT1P19526 365 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 RAB4AP20338 218 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 EPHA1P21709 976 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 VEGFBP49765 207 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 P2RX1P51575 399 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 MFGE8Q08431 387 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 OR8B8Q15620 311 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 MEP1AQ16819 746 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 DEFB133Q30KQ1 61 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 WDR5BQ86VZ2 330 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ACOT4Q8N9L9 421 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 C11orf40Q8WZ69 217 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 RNF170Q96K19 258 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FEVQ99581 238 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 JAM3Q9BX67 310 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 IL26Q9NPH9 171 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 IL17CQ9P0M4 197 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 LRIT1Q9P2V4 623 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ADAMTSL3P82987 1691 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 XRN1Q8IZH2 1706 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 NPIPA5A0A0B4J1W7 369 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM212A6NML5 194 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 E7ESA3 106 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 NARSO43776 548 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TIMM8AO60220 97 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SLC22A5O76082 557 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ABHD16AO95870 558 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 RAB40ALP0C0E4 278 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CD27P26842 260 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 DPP4P27487 766 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SLC5A2P31639 672 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 MFAP5Q13361 173 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 KHDC1LQ5JSQ8 128 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 LDLRAD1Q5T700 205 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PSAPL1Q6NUJ1 521 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CDHR3Q6ZTQ4 885 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 RNF113BQ8IZP6 322 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 GCNT2Q8N0V5 402 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 LSM14AQ8ND56 463 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 OR4A16Q8NH70 328 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 RAB40AQ8WXH6 277 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 IGSF8Q969P0 613 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SLAMF9Q96A28 289 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FAM46AQ96IP4 442 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PRRX2Q99811 253 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 DPH2Q9BQC3 489 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CCDC106Q9BWC9 280 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FAM117AQ9C073 453 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ZDHHC5Q9C0B5 715 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TM7SF3Q9NS93 570 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 MUTYHQ9UIF7 546 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PCYT1BQ9Y5K3 369 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 IGKV6-21A0A0C4DH24 114 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PMS2P1A4D2B8 440 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 NPBWR1P48145 328 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 DLX5P56178 289 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CTBSQ01459 385 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TAZQ16635 292 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 UGT8Q16880 541 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF791Q3KP31 576 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 C14orf28Q4W4Y0 310 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 AADACL3Q5VUY0 350 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PM20D1Q6GTS8 502 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 C22orf42Q6IC83 251 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PNCKQ6P2M8 343 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 USP51Q70EK9 711 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 TMPRSS7Q7RTY8 843 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SPRED1Q7Z699 444 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CISD2Q8N5K1 135 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 OR7G3Q8NG95 312 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ANKRD9Q96BM1 317 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 FBXL20Q96IG2 436 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 DCBLD2Q96PD2 775 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 XYLT2Q9H1B5 865 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SERTAD4Q9NUC0 356 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 CHD4Q14839 1912 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SNED1Q8TER0 1413 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 LRIT2A6NDA9 550 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 NPIPB15A6NHN6 443 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 IL2RAP01589 272 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 IL7P13232 177 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 KIAA1024LP59773 190 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 RGNQ15493 299 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 DEFB110Q30KQ9 67 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 ADGRG3Q86Y34 549 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 RBMXL3Q8N7X1 1067 aaKnown RBP3.81□□□□□ -1.8
SCN3A-201ENST00000283254 OR52B6Q8NGF0 335 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 PHYHIPQ92561 330 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SLC46A1Q96NT5 459 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SAMD10Q9BYL1 202 aa3.81□□□□□ -1.8
SCN3A-201ENST00000283254 SCPEP1Q9HB40 452 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms