RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 LIN7BQ9HAP6 207 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 SLC6A20Q9NP91 592 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 GLS2Q9UI32 602 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 CCL26Q9Y258 94 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 F8W036 122 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 OR10H2O60403 315 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 MTRF1O75570 445 aaKnown RBP13.22□□□□□ -0.29
VPS26B-201ENST00000281187 PAK4O96013 591 aaPredicted RBP13.22□□□□□ -0.29
VPS26B-201ENST00000281187 PPP3CBP16298 524 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 OPRD1P41143 372 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 BLOC1S1P78537 153 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 ZNF155Q12901 538 aaPredicted RBP13.22□□□□□ -0.29
VPS26B-201ENST00000281187 PDE7AQ13946 482 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 LINC00303Q3SY05 128 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 DEFB134Q4QY38 66 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 SLC8B1Q6J4K2 584 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 ACOT4Q8N9L9 421 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 SCARB1Q8WTV0 552 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 ALG14Q96F25 216 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 LMF1Q96S06 567 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 HCAR1Q9BXC0 346 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 SRA1Q9HD15 236 aaKnown RBP13.22□□□□□ -0.29
VPS26B-201ENST00000281187 ISYNA1Q9NPH2 558 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 ABRACLQ9P1F3 81 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 BPTFQ12830 3046 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 MYO16Q9Y6X6 1858 aa13.22□□□□□ -0.29
VPS26B-201ENST00000281187 CACNB4O00305 520 aaPredicted RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 RAB3AP20336 220 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 ACHEP22303 614 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 NKPD1Q17RQ9 610 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 SETD7Q8WTS6 366 aaKnown RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 NKX3-1Q99801 234 aaPredicted RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 GDF15Q99988 308 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 LGR4Q9BXB1 951 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 B3GNT4Q9C0J1 378 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 BRCA1P38398 1863 aaKnown RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 A0A1W2PS29 197 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 MANSC4A6NHS7 340 aaPredicted RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 CDC42EP2O14613 210 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 PRAMEF2O60811 474 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 FOXK2Q01167 660 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 CAP1Q01518 475 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 PUS10Q3MIT2 529 aaKnown RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 EIPR1Q53HC9 387 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 TPGS2Q68CL5 300 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 INO80EQ8NBZ0 244 aaPredicted RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 THEM6Q8WUY1 208 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 ZNF514Q96K75 400 aaPredicted RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 KCNJ15Q99712 375 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 FANCFQ9NPI8 374 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 SCN3AQ9NY46 2000 aa13.21□□□□□ -0.29
VPS26B-201ENST00000281187 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.29
VPS26B-201ENST00000281187 C7orf66A4D0T2 115 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 TRAPPC13A5PLN9 417 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 OR52A4PA6NMU1 304 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 OR6A2O95222 327 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 SBK2P0C263 348 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 C6P13671 934 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 FPR3P25089 353 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 CDKN3Q16667 212 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 NIPAL3Q6P499 406 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 ANKRD53Q8N9V6 530 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 LYSMD1Q96S90 227 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 CA10Q9NS85 328 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 LIPT1Q9Y234 373 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 IER3IP1Q9Y5U9 82 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 SPACA6W5XKT8 324 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 F5P12259 2224 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 TSC2P49815 1807 aa13.21□□□□□ -0.3
VPS26B-201ENST00000281187 IGLV3-16A0A075B6K0 115 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 KDM4EB2RXH2 506 aaPredicted RBP13.2□□□□□ -0.3
VPS26B-201ENST00000281187 EEF1E1-BLOC1S5C9J1V9 151 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 NUDT14O95848 222 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 CBR1P16152 277 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 LUMP51884 338 aaPredicted RBP13.2□□□□□ -0.3
VPS26B-201ENST00000281187 AADACL4Q5VUY2 407 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 PARS2Q7L3T8 475 aaKnown RBP13.2□□□□□ -0.3
VPS26B-201ENST00000281187 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 OR6V1Q8N148 313 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 OR8D1Q8WZ84 308 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 SUSD6Q92537 303 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 OR1F2PQ96R84 312 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 TNFRSF13CQ96RJ3 184 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 CNN2Q99439 309 aaKnown RBP13.2□□□□□ -0.3
VPS26B-201ENST00000281187 SLC38A3Q99624 504 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 C7orf50Q9BRJ6 194 aaKnown RBP13.2□□□□□ -0.3
VPS26B-201ENST00000281187 DOCK4Q8N1I0 1966 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 AGPAT2O15120 278 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 SULT1A3P0DMM9 295 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 SULT1A4P0DMN0 295 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 EPXP11678 715 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 ITPKBP27987 946 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 SLC6A6P31641 620 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 AQP2P41181 271 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 MBOAT2Q6ZWT7 520 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 NR2C2APQ86WQ0 139 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 MORN4Q8NDC4 146 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 THAP6Q8TBB0 222 aa13.2□□□□□ -0.3
VPS26B-201ENST00000281187 IRF7Q92985 503 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms