RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CREB3L2Q70SY1 520 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ANKRD9Q96BM1 317 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 AMDHD1Q96NU7 426 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 UBL7Q96S82 380 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ARHGAP9Q9BRR9 750 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 CLMPQ9H6B4 373 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 PRELID3BQ9Y3B1 194 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 IER3IP1Q9Y5U9 82 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 H0Y8G0 127 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 GPX3P22352 226 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 CST6Q15828 149 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 CCL14Q16627 93 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 LETMD1Q6P1Q0 360 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 RNF113BQ8IZP6 322 aaKnown RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 OR4K15Q8NH41 348 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 OR14L1PQ8NHC6 308 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 SCAMP4Q969E2 229 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 SLC17A9Q9BYT1 436 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 KCNK13Q9HB14 408 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 MYOCOSA0A1B0GUC4 107 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 HLA-HP01893 362 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 GNB3P16520 340 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 HOXC13P31276 330 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 SNU13P55769 128 aaKnown RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 NLRP8Q86W28 1048 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 OR6V1Q8N148 313 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ACOT11Q8WXI4 607 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 TOMM40LQ969M1 308 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 RBMXL1Q96E39 390 aaKnown RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 OR52A5Q9H2C5 316 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 GCM1Q9NP62 436 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 DOPEY2Q9Y3R5 2298 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 CRHBPP24387 322 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 DPY19L4Q7Z388 723 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 PARP16Q8N5Y8 322 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 NPWQ8N729 165 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 KDM1BQ8NB78 822 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ZFP90Q8TF47 636 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 CPEB1Q9BZB8 566 aaKnown RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 PLEKHM1Q9Y4G2 1056 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 BTBD17A6NE02 478 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF623O75123 536 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 CSNK1A1P48729 337 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 DEFA6Q01524 100 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 KCNJ8Q15842 424 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 OR4N5Q8IXE1 308 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 OR14A16Q8NHC5 309 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 QPCTLQ9NXS2 382 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 SLC10A2Q12908 348 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 PLCXD3Q63HM9 321 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 PAQR8Q8TEZ7 354 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 SLAMF9Q96A28 289 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ZMYND19Q96E35 227 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 SLC30A3Q99726 388 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 PRMT8Q9NR22 394 aaPredicted RBP7.49□□□□□ -1.21
LIMD1-201ENST00000273317 LCATP04180 440 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 IL32P24001 234 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 UBE2KP61086 200 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 TP53I3Q53FA7 332 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 BRI3BPQ8WY22 251 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 ST6GALNAC5Q9BVH7 336 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 HCAR1Q9BXC0 346 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 NENFQ9UMX5 172 aa7.49□□□□□ -1.21
LIMD1-201ENST00000273317 TSFMP43897 325 aaKnown RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 LTBQ06643 244 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CDHR3Q6ZTQ4 885 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 FAM174AQ8TBP5 190 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ZBTB8AQ96BR9 441 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SENP5Q96HI0 755 aaPredicted RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 RASD1Q9Y272 281 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 DOCK7Q96N67 2140 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ETV4P43268 484 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SFXN2Q96NB2 322 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 NRIP3Q9NQ35 241 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 NRAPQ86VF7 1730 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 TNFRSF10AO00220 468 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CACNG3O60359 315 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 KCNK2O95069 426 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 SCGB1D1O95968 90 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ARSDP51689 593 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 P2RY14Q15391 338 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF551Q7Z340 670 aaPredicted RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 NAGSQ8N159 534 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 BBS1Q8NFJ9 593 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 OR4D6Q8NGJ1 314 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 PEX11GQ96HA9 241 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CDCA3Q99618 268 aaPredicted RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 LPAR4Q99677 370 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 HIPK2Q9H2X6 1198 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ACSM3Q53FZ2 586 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 FAM69BQ5VUD6 431 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CLECL1Q8IZS7 167 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 ARPC5LQ9BPX5 153 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CMSS1Q9BQ75 279 aaKnown RBP7.48□□□□□ -1.21
LIMD1-201ENST00000273317 CACNA1DQ01668 2161 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 DPM1O60762 260 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 METTL15P1P0C7V9 234 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 TGM4P49221 684 aa7.48□□□□□ -1.21
LIMD1-201ENST00000273317 TNK1Q13470 666 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms