RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 BCAS1O75363 584 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 IFNA1P01562 189 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 HOXD4P09016 255 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 UCHL1P09936 223 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 SLC2A5P22732 501 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 HOXD9P28356 352 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 HLA-FP30511 346 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 STC1P52823 247 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 SLC35A1P78382 337 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 SCARB2Q14108 478 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TBC1D28Q2M2D7 210 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PRAMEF8Q5VWM4 474 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PRAMEF7Q5VXH5 474 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 NKAIN2Q5VXU1 208 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 EPGNQ6UW88 154 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 BAIAP2L2Q6UXY1 529 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 SHISA6Q6ZSJ9 500 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TMEM68Q96MH6 324 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 SPOCK3Q9BQ16 436 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TREX2Q9BQ50 279 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 SMOXQ9NWM0 555 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 LRFN1Q9P244 771 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 UGT2A1Q9Y4X1 527 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TIMM8BQ9Y5J9 83 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 A0A1W2PQ09 198 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 OR6C6A6NF89 314 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 BLOC1S5-TXNDC5H3BN57 136 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PRKACGP22612 351 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ERVPABLB-1P60509 514 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TLE3Q04726 772 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ARFRP1Q13795 201 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PLEKHN1Q494U1 663 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 PLK5Q496M5 336 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 CRB2Q5IJ48 1285 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PLPP6Q8IY26 295 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 KLHDC8AQ8IYD2 350 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ZNF676Q8N7Q3 588 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 CNOT9Q92600 299 aaKnown RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 FGF14Q92915 247 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 MALSU1Q96EH3 234 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 IMP4Q96G21 291 aaKnown RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 SLC30A3Q99726 388 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 DPH1Q9BZG8 443 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ZNF160Q9HCG1 818 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 IL20RAQ9UHF4 553 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 NME7Q9Y5B8 376 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ANKRD33BA6NCL7 494 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 K7EPK0 472 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 K7EQS6 105 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PHYHO14832 338 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TFP02787 698 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ADORA3P0DMS8 318 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 UQCRC2P22695 453 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 IGFBP6P24592 240 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 CAMLGP49069 296 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ACTG1P63261 375 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ZNF92Q03936 586 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 FAM71E2Q8N5Q1 922 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ZFP90Q8TF47 636 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 HOXB13Q92826 284 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 UBL7Q96S82 380 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 C12orf57Q99622 126 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 RBM24Q9BX46 236 aaKnown RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 ADAM19Q9H013 955 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 SIAEQ9HAT2 523 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 C14orf166Q9Y224 244 aaKnown RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 PCDHGA1Q9Y5H4 931 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 RPS10-NUDT3A0A1W2PQS6 291 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TRBC2A0A5B9 178 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 OR51F1A6NGY5 319 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PRKYO43930 277 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 B4GALT3O60512 393 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PNMTP11086 282 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 RPS10P46783 165 aaKnown RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 CARD18P57730 90 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ZP2Q05996 745 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 GANABQ14697 944 aaKnown RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 PEA15Q15121 130 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ZNF528Q3MIS6 628 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 BTNL3Q6UXE8 466 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 ST8SIA2Q92186 375 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 RELTQ969Z4 430 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 DERL2Q9GZP9 239 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 NXF5Q9H1B4 397 aaKnown RBP7.31□□□□□ -1.24
USP3-201ENST00000268049 DEFB127Q9H1M4 99 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 NELFAQ9H3P2 528 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PRDM9Q9NQV7 894 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TRIOBPQ9H2D6 2365 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 CCL21O00585 134 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 LILRB5O75023 590 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 IL3P08700 152 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 DNAJB1P25685 340 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 PTGER4P35408 488 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 FXYD6P3P58550 94 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 HERV-K104P61576 105 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 SSPNQ14714 243 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 IGSF11Q5DX21 431 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TMEM196Q5HYL7 178 aa7.31□□□□□ -1.24
USP3-201ENST00000268049 TMEM184AQ6ZMB5 413 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms