RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NTRK2Q16620 822 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 PGGHGQ32M88 737 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 ARMC10Q8N2F6 343 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 SAMD8Q96LT4 415 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 RASL10BQ96S79 203 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 OR52D1Q9H346 318 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 VCX3AQ9NNX9 186 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 RYDENQ9NUL5 291 aaKnown RBP14.93□□□□□ -0.02
TPM1-201ENST00000267996 MUC6Q6W4X9 2439 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 NSG1A0A0A6YYJ2 146 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 ENO4A6NNW6 628 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 C17orf51A8MQB3 221 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 ENTPD6O75354 484 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 RCBTB2O95199 551 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 FTH1P19P0C7X4 201 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 FUT1P19526 365 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 PGCP20142 388 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 NUDT6P53370 316 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 RPS18P62269 152 aaKnown RBP14.93□□□□□ -0.02
TPM1-201ENST00000267996 CRYZQ08257 329 aaKnown RBP14.93□□□□□ -0.02
TPM1-201ENST00000267996 FHL1Q13642 323 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 GTF2IRD2BQ6EKJ0 949 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 GTF2IRD2Q86UP8 949 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 SLC43A2Q8N370 569 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 OR13C2Q8NGS9 318 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 DGCR14Q96DF8 476 aaKnown RBP14.93□□□□□ -0.02
TPM1-201ENST00000267996 COPS4Q9BT78 406 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 GPR87Q9BY21 358 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 PRRG3Q9BZD7 231 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 UBQLN3Q9H347 655 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 HHATLQ9HCP6 504 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 MED17Q9NVC6 651 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 CNOT2Q9NZN8 540 aaKnown RBP14.93□□□□□ -0.02
TPM1-201ENST00000267996 CEPT1Q9Y6K0 416 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 ELOA3DA6NLF2 546 aaPredicted RBP14.92□□□□□ -0.02
TPM1-201ENST00000267996 C21orf140B9A014 251 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 HCN1O60741 890 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 MT-ND2P03891 347 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 CDK1P06493 297 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 TTKP33981 857 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 RPS15P62841 145 aaKnown RBP14.92□□□□□ -0.02
TPM1-201ENST00000267996 C17orf67Q0P5P2 114 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 DNASE1L3Q13609 305 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 CBFBQ13951 182 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 NEDD8Q15843 81 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 SNAPC1Q16533 368 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 ZNF791Q3KP31 576 aaPredicted RBP14.92□□□□□ -0.02
TPM1-201ENST00000267996 ELOA3BQ3SY89 546 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 CLEC12AQ5QGZ9 265 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 MEDAGQ5VYS4 303 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 SLC30A6Q6NXT4 461 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 AHSA2Q719I0 299 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 GPR141Q7Z602 305 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 NLGN4YQ8NFZ3 816 aaPredicted RBP14.92□□□□□ -0.02
TPM1-201ENST00000267996 ELOA3Q8NG57 546 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 OR2T33Q8NG76 320 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 OR5M3Q8NGP4 307 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 B4GALNT2Q8NHY0 566 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 TMEM163Q8TC26 289 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 FANK1Q8TC84 345 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 GPR119Q8TDV5 335 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 DUSP19Q8WTR2 217 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 MYDGFQ969H8 173 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 MUL1Q969V5 352 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 SPACA9Q96E40 222 aaPredicted RBP14.92□□□□□ -0.02
TPM1-201ENST00000267996 SGTBQ96EQ0 304 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 SLC38A2Q96QD8 506 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 ENKD1Q9H0I2 346 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 AMBNQ9NP70 447 aa14.92□□□□□ -0.02
TPM1-201ENST00000267996 WDFY3Q8IZQ1 3526 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 EFCAB10A6NFE3 127 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 BHLHE40O14503 412 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 SURF4O15260 269 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 TLX2O43763 284 aaPredicted RBP14.91□□□□□ -0.02
TPM1-201ENST00000267996 CDC40O60508 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
TPM1-201ENST00000267996 TNFSF15O95150 251 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 HMGN1P05114 100 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 SAGP10523 405 aaPredicted RBP14.91□□□□□ -0.02
TPM1-201ENST00000267996 PIPP12273 146 aaPredicted RBP14.91□□□□□ -0.02
TPM1-201ENST00000267996 ITPKBP27987 946 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 TACR3P29371 465 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 PTGDSP41222 190 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 MASP1P48740 699 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 EMX1Q04741 257 aaPredicted RBP14.91□□□□□ -0.02
TPM1-201ENST00000267996 RAB39AQ14964 217 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 TOMM34Q15785 309 aaPredicted RBP14.91□□□□□ -0.02
TPM1-201ENST00000267996 SYT14P1Q58G82 188 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 SMARCD3Q6STE5 483 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 SLC46A3Q7Z3Q1 461 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 LNX2Q8N448 690 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 SVOPQ8N4V2 548 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 ZNF563Q8TA94 476 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 FAR1Q8WVX9 515 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 LIPHQ8WWY8 451 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 TEX12Q9BXU0 123 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 CCDC90BQ9GZT6 254 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 ZNF160Q9HCG1 818 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 DNAJC27Q9NZQ0 273 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 PCNX3Q9H6A9 2034 aa14.91□□□□□ -0.02
TPM1-201ENST00000267996 IGLV3-32A0A0A0MS00 114 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms