RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 DEPDC7Q96QD5 511 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 CCDC3Q9BQI4 270 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 GPR174Q9BXC1 333 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.25□□□□□ -0.77
MSH3-201ENST00000265081 PRO3102Q9H379 93 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 ZNF576Q9H609 170 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 MED20Q9H944 212 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 NRIP3Q9NQ35 241 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 A0A0A6YYC8 382 aaPredicted RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 TRAV1-2A0A0B4J238 106 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 SERINC4A6NH21 518 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 I3L1I5 382 aaPredicted RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 DLGAP3O95886 979 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 BMP7P18075 431 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 NOS3P29474 1203 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 RFX3P48380 749 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 SKP2Q13309 424 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 DPY19L2P2Q6ZN68 376 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 KLBQ86Z14 1044 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 CDK20Q8IZL9 346 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 C7orf57Q8NEG2 295 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 OR51G2Q8NGK0 314 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 OR5W2Q8NH69 310 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 CTRCQ99895 268 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 TTYH2Q9BSA4 534 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 OR10A5Q9H207 317 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 PPIL3Q9H2H8 161 aaKnown RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 KCNN2Q9H2S1 579 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 B3GAT2Q9NPZ5 323 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 TRIM36Q9NQ86 728 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 ZC3H12DA2A288 527 aaKnown RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 IMPA2O14732 288 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 RGS13O14921 159 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 APEHP13798 732 aaKnown RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 ZNF3P17036 446 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 MAZP56270 477 aaKnown RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 SCN1BQ07699 218 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 SERTAD2Q14140 314 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 TCTE1Q5JU00 501 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 UNQ9370/PRO34162Q6UXP9 181 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 FRMD1Q8N878 549 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 NEIL3Q8TAT5 605 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 PTPMT1Q8WUK0 201 aaPredicted RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 C3orf49Q96BT1 292 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 PRTFDC1Q9NRG1 225 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 MRPS33Q9Y291 106 aaKnown RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 MMACHCQ9Y4U1 282 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 TRAV27A0A087WT01 109 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 TMEM127O75204 238 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 IL33O95760 270 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 EIF2B2P49770 351 aaKnown RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 SLC37A1P57057 533 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 FAM122BQ7Z309 247 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 ATG4DQ86TL0 474 aaPredicted RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 GKN2Q86XP6 184 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 NPEPL1Q8NDH3 523 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 OR14A16Q8NHC5 309 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 PEX11GQ96HA9 241 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 PTCHD1Q96NR3 888 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 NEDD4LQ96PU5 975 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 OR1F2PQ96R84 312 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 TNFRSF13CQ96RJ3 184 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 MAP3K3Q99759 626 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 NDRG2Q9UN36 371 aaKnown RBP10.24□□□□□ -0.77
MSH3-201ENST00000265081 USP34Q70CQ2 3546 aa10.24□□□□□ -0.77
MSH3-201ENST00000265081 A0A0B4J293 547 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 DVL2O14641 736 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 MT-ND5P03915 603 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 PROS1P07225 676 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 NRG3P56975 720 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 DEFB110Q30KQ9 67 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ZNF542PQ5EBM4 170 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ALG10BQ5I7T1 473 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ZNF544Q6NX49 715 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ZNF761Q86XN6 746 aaPredicted RBP10.23□□□□□ -0.77
MSH3-201ENST00000265081 TDHQ8IZJ6 230 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ADIPOR1Q96A54 375 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 RNF31Q96EP0 1072 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 MVB12AQ96EY5 273 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 TRAF4Q9BUZ4 470 aaPredicted RBP10.23□□□□□ -0.77
MSH3-201ENST00000265081 SLC22A4Q9H015 551 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 CYSLTR2Q9NS75 346 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 H2AFY2Q9P0M6 372 aaPredicted RBP10.23□□□□□ -0.77
MSH3-201ENST00000265081 ITGB1BP2Q9UKP3 347 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 SCN2AQ99250 2005 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 FABP12A6NFH5 140 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 OR10H2O60403 315 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 PPM1BO75688 479 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 OR7A10O76100 309 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 APOA1P02647 267 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 CTSEP14091 401 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 CELP19835 753 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 F8A1P23610 371 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 UQCRC1P31930 480 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 RPS11P62280 158 aaKnown RBP eCLIP10.23□□□□□ -0.77
MSH3-201ENST00000265081 MXD1Q05195 221 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 INSL4Q14641 139 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 ARMC6Q6NXE6 501 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 SPATC1Q76KD6 591 aa10.23□□□□□ -0.77
MSH3-201ENST00000265081 MARCH9Q86YJ5 346 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms