RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 CNOT9Q92600 299 aaKnown RBP11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 KLHL15Q96M94 604 aa11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 MMADHCQ9H3L0 296 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 C12orf10Q9HB07 376 aa11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 KRCC1Q9NPI7 259 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 ARL8BQ9NVJ2 186 aa11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 DNAJB12Q9NXW2 375 aaKnown RBP11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 C6orf203Q9P0P8 240 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 TMEM181Q9P2C4 612 aa11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 CHRNA9Q9UGM1 479 aa11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 SH3GLB1Q9Y371 365 aa11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 HDGFL3Q9Y3E1 203 aa11.35□□□□□ -0.59
CLNS1A-201ENST00000263309 PRAMEF27A3QJZ7 478 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 CD8B2A6NJW9 211 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SLC22A20A6NK97 555 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SULT2B1O00204 365 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 OR2T1O43869 369 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 FMO6PO60774 539 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 IFNW1P05000 195 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 FESP07332 822 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 TACR3P29371 465 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SFTPDP35247 375 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 OPRM1P35372 400 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 TIMP3P35625 211 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 KCNJ5P48544 419 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 STARP49675 285 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 GSK3BP49841 420 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 RNF144AP50876 292 aaPredicted RBP11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 CTBP2P56545 445 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 CLDN15P56746 228 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 NUP107P57740 925 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SLC35A1P78382 337 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SLC25A3Q00325 362 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SRSF1Q07955 248 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SELPLGQ14242 412 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 MFSD13AQ14CX5 517 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SLC25A53Q5H9E4 307 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 MTX3Q5HYI7 312 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 ALG10BQ5I7T1 473 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 NSUN5P2Q63ZY6 315 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 HMGN2P46Q86SG4 172 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 PTOV1Q86YD1 416 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SMYD1Q8NB12 490 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 OR2V1Q8NHB1 315 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 OSTF1Q92882 214 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 WNT2BQ93097 391 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 WDYHV1Q96HA8 205 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 NSMCE2Q96MF7 247 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 MCHR1Q99705 422 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 IKZF5Q9H5V7 419 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 RLIMQ9NVW2 624 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 CMTM6Q9NX76 183 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 KCNE5Q9UJ90 142 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 TINAGQ9UJW2 476 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 ZNF175Q9Y473 711 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 LIPGQ9Y5X9 500 aa11.34□□□□□ -0.59
CLNS1A-201ENST00000263309 TMED7-TICAM2A0A0A6YYA0 188 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 A8MVM7 634 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 FXYD1O00168 92 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 DNPH1O43598 174 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 LGI1O95970 557 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 HIST1H2ABP04908 130 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 GPIP06744 558 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 CRHP06850 196 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 GKN3PP0CG01 181 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 HSD17B1P14061 328 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 ZNF708P17019 499 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 TCN1P20061 433 aaPredicted RBP11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 CCNA2P20248 432 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 ENPP1P22413 925 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 PEX19P40855 299 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 LHX2P50458 406 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 SMIM11AP58511 58 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 TAS2R41P59536 307 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 FOXF1Q12946 379 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 RNPS1Q15287 305 aaKnown RBP11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 IFI44LQ53G44 452 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 CYBRD1Q53TN4 286 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 RIPPLY2Q5TAB7 128 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 ZNF613Q6PF04 617 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 TTC33Q6PID6 262 aaPredicted RBP11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 HIST3H2AQ7L7L0 130 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 OLIG3Q7RTU3 272 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 STK32CQ86UX6 486 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 CLIP4Q8N3C7 705 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 ZNF808Q8N4W9 903 aaPredicted RBP11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 LSMEM1Q8N8F7 131 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 OR5M1Q8NGP8 315 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 HIST1H2ACQ93077 130 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 HS6ST2Q96MM7 605 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 BTBD10Q9BSF8 475 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 RTN4RQ9BZR6 473 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 TRIM8Q9BZR9 551 aa11.33□□□□□ -0.6
CLNS1A-201ENST00000263309 NDEL1Q9GZM8 345 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms