RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 HCRTR2O43614 444 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 RAP2AP10114 183 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 ZNF136P52737 540 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 TMBIM6P55061 237 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 CD300CQ08708 224 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 IGFN1Q86VF2 1251 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 TXNDC15Q96J42 360 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 DEPPQ9NTK1 212 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 NDUFAF4Q9P032 175 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 RHCGQ9UBD6 479 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 DSPP15924 2871 aaKnown RBP25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 SYT5O00445 386 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 NAT2P11245 290 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 DNASE1L1P49184 302 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 GNG2P59768 71 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 PPP1R8Q12972 351 aaKnown RBP25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 SKP2Q13309 424 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 TBR1Q16650 682 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 EIPR1Q53HC9 387 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 CHAC2Q8WUX2 184 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 LRTOMTQ8WZ04 291 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 IL1RAPQ9NPH3 570 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 POU2F3Q9UKI9 436 aa25.07■■□□□ 1.6
SMARCD3-201ENST00000262188 A0A1W2PQD3 144 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 CLPXO76031 633 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 PDGFAP04085 211 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 FABP3P05413 133 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 ZNF26P17031 533 aaPredicted RBP25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 CASRP41180 1078 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 LILRA2Q8N149 483 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 DUS3LQ96G46 650 aaKnown RBP25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 MAGIXQ9H6Y5 334 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 KLHL28Q9NXS3 571 aa25.06■■□□□ 1.6
SMARCD3-201ENST00000262188 OR5H15A6NDH6 313 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 ZNF264O43296 627 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 SLC25A12O75746 678 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 ARG2P78540 354 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 GANABQ14697 944 aaKnown RBP25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 PAPD5Q8NDF8 572 aaKnown RBP25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 FAM71CQ8NEG0 241 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 SGCZQ96LD1 299 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 HMG20AQ9NP66 347 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 MED11Q9P086 117 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 SLC9A8Q9Y2E8 581 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 WIF1Q9Y5W5 379 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 IFNW1P05000 195 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 HTR2AP28223 471 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 S100ZQ8WXG8 99 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 SLC35A3Q9Y2D2 325 aa25.05■■□□□ 1.6
SMARCD3-201ENST00000262188 CACNA1GO43497 2377 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 PINLYPA6NC86 204 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 CPSF4LA6NMK7 179 aaKnown RBP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 CLDN25C9JDP6 229 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 GNB5O14775 395 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 ADH7P40394 386 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 ACAA2P42765 397 aaKnown RBP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 UCNP55089 124 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 PIN1Q13526 163 aaPredicted RBP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 DND1Q8IYX4 353 aaKnown RBP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 JSRP1Q96MG2 331 aaPredicted RBP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 PKP2Q99959 881 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 FFAR1O14842 300 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 WISP1O95388 367 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 NTN1O95631 604 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 P04436 131 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 IFNA8P32881 189 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 MAGEA2P43356 314 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 CLK3P49761 638 aaKnown RBP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 TOMM34Q15785 309 aaPredicted RBP25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 COL28A1Q2UY09 1125 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 HMBOX1Q6NT76 420 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 CMIPQ8IY22 773 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 ANGPTL4Q9BY76 406 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 OR2B2Q9GZK3 357 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 SEMA6AQ9H2E6 1030 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 VNN3Q9NY84 501 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 PPP4R1LQ9P1A2 415 aa25.04■■□□□ 1.6
SMARCD3-201ENST00000262188 CDC40O60508 579 aaKnown RBP eCLIP25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 WDSUB1Q8N9V3 476 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 MDS2Q8NDY4 140 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 TOR1AIP2Q8NFQ8 470 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 ZNF300Q96RE9 604 aaPredicted RBP25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 MCHR1Q99705 422 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 SACM1LQ9NTJ5 587 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 FBXL2Q9UKC9 423 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 ICAM5Q9UMF0 924 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 ENPP4Q9Y6X5 453 aa25.03■■□□□ 1.6
SMARCD3-201ENST00000262188 CCNA2P20248 432 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 PTNP21246 168 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 RFC3P40938 356 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 IST1P53990 364 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 NFATC3Q12968 1075 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 CDONQ4KMG0 1287 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 GPALPP1Q8IXQ4 340 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 HAS2Q92819 552 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 TRIM63Q969Q1 353 aa25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 SECISBP2Q96T21 854 aaKnown RBP25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 SMAD5Q99717 465 aaKnown RBP25.02■■□□□ 1.6
SMARCD3-201ENST00000262188 CNIH4Q9P003 139 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms